RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SAP130Q9H0E3 1048 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ACKR4Q9NPB9 350 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 THSD1Q9NS62 852 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ZDHHC7Q9NXF8 308 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 TP53TG5Q9Y2B4 290 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ADAM12O43184 909 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 DENRO43583 198 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 RAB3DO95716 219 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CLDN10P78369 228 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 NKAIN2Q5VXU1 208 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 C3P1Q6ZMU1 363 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 MRPL43Q8N983 215 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR5D14Q8NGL3 314 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 INTS14Q96SY0 518 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR2B2Q9GZK3 357 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TEX10Q9NXF1 929 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 GDE1Q9NZC3 331 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR14J1Q9UGF5 321 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 BTNL2Q9UIR0 455 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 MDFIC2A0A1B0GVS7 189 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ADARB1P78563 741 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR4K15Q8NH41 348 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CNOT9Q92600 299 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR10A5Q9H207 317 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 HHATLQ9HCP6 504 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TAAR2Q9P1P5 351 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 C5P01031 1676 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 NSG1A0A0A6YYJ2 146 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 SLC16A7O60669 478 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 F13BP05160 661 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 DCTP40126 519 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 MAGEA6P43360 314 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 BDH1Q02338 343 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 FGL2Q14314 439 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF610Q8N9Z0 462 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TXNDC15Q96J42 360 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 C3orf30Q96M34 536 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 HCAR1Q9BXC0 346 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF638Q14966 1978 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR6C6A6NF89 314 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 IVDP26440 423 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CD6P30203 668 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OPRL1P41146 370 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ACSM3Q53FZ2 586 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 KDELC1Q6UW63 502 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 GPR148Q8TDV2 347 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CHRDQ9H2X0 955 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF334Q9HCZ1 680 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OR6C2Q9NZP2 312 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 PCDHB10Q9UN67 800 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF443Q9Y2A4 671 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 LILRB5O75023 590 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 DNAJB5O75953 348 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 SNAPC5O75971 98 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 NFATC4Q14934 902 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 DPPA4Q7L190 304 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 APMAPQ9HDC9 416 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 OBP2BQ9NPH6 170 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 SDR39U1Q9NRG7 319 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ADAMTS4O75173 837 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TNFSF4P23510 183 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 PPP5CP53041 499 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 SPOCK1Q08629 439 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 FGFBP1Q14512 234 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TMEM53Q6P2H8 277 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 PBDC1Q9BVG4 233 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 TMEM181Q9P2C4 612 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 HSPE1-MOB4S4R3N1 261 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF736B4DX44 427 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 UGDHO60701 494 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF44P15621 663 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CD38P28907 300 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 HLA-FP30511 346 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 MGAT3Q09327 533 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CTSL3PQ5NE16 218 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 CYS1Q717R9 158 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 PDZD9Q8IXQ8 264 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 SLC39A11Q8N1S5 342 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ADAMTS16Q8TE57 1224 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 FRZBQ92765 325 aa10.29□□□□□ -0.76
VAPB-204ENST00000475243 ZNF845Q96IR2 970 aaPredicted RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 DCAF13Q9NV06 445 aaKnown RBP10.29□□□□□ -0.76
VAPB-204ENST00000475243 NCR1O76036 304 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ATG12O94817 140 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 SERPINE2P07093 398 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BDKRB2P30411 391 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 NT5C3BQ969T7 300 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PGAP3Q96FM1 320 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 EGLN2Q96KS0 407 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 QRSL1Q9H0R6 528 aaKnown RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 ZNF696Q9H7X3 374 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 MED20Q9H944 212 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 DNAJC25-GNG10A0A024R161 153 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms