RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 HDAC3O15379 428 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 NKX2-2O95096 273 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 PSMB1P20618 241 aaKnown RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 PRPH2P23942 346 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 PSMA4P25789 261 aaKnown RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 MAP3K8P41279 467 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 CARD18P57730 90 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 HSPB3Q12988 150 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 VEZF1Q14119 521 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 TSC22D1Q15714 1073 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 PDSS1Q5T2R2 415 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 HEPHL1Q6MZM0 1159 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 ESPNLQ6ZVH7 1005 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 STEAP2Q8NFT2 490 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 ACTRT2Q8TDY3 377 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 ROBO4Q8WZ75 1007 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 ZBTB8AQ96BR9 441 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 S100PBPQ96BU1 408 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 TRMT61AQ96FX7 289 aaKnown RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 EGLN2Q96KS0 407 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 PPP1R36Q96LQ0 422 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 C3orf30Q96M34 536 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 HHATLQ9HCP6 504 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 MED17Q9NVC6 651 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 FBXO34Q9NWN3 711 aa13.93□□□□□ -0.18
SRRT-209ENST00000474896 FBN1P35555 2871 aaKnown RBP13.93□□□□□ -0.18
SRRT-209ENST00000474896 OVOL3O00110 214 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 LSM1O15116 133 aaKnown RBP13.92□□□□□ -0.18
SRRT-209ENST00000474896 CLOCKO15516 846 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 SEC22BO75396 215 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 NTN1O95631 604 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 IFI6P09912 130 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 ME2P23368 584 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 AGTR1P30556 359 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 GPC1P35052 558 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 IDUAP35475 653 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 ZNF41P51814 821 aaPredicted RBP13.92□□□□□ -0.18
SRRT-209ENST00000474896 DMTNQ08495 405 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 PLPPR5Q32ZL2 321 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 VPS26BQ4G0F5 336 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 ADAM5Q6NVV9 412 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 FIGNL1Q6PIW4 674 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 IKBIPQ70UQ0 350 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 NUP43Q8NFH3 380 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 CEP70Q8NHQ1 597 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 POC1BQ8TC44 478 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 FAM110BQ8TC76 370 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 HOXB13Q92826 284 aaPredicted RBP13.92□□□□□ -0.18
SRRT-209ENST00000474896 CIDECQ96AQ7 238 aaPredicted RBP13.92□□□□□ -0.18
SRRT-209ENST00000474896 TUBGCP3Q96CW5 907 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 SH3YL1Q96HL8 342 aaPredicted RBP13.92□□□□□ -0.18
SRRT-209ENST00000474896 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 REG4Q9BYZ8 158 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 LRTM1Q9HBL6 345 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 C1orf109Q9NX04 203 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 RNF115Q9Y4L5 304 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 USH1CQ9Y6N9 552 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 ABCA1O95477 2261 aa13.92□□□□□ -0.18
SRRT-209ENST00000474896 C7orf72A4D263 438 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 TRPC5OSA6NMA1 111 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 ZNF195O14628 629 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 PDPK1O15530 556 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 KCNK2O95069 426 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 NGFRP08138 427 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 SOD3P08294 240 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 VIMP08670 466 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 HPGDP15428 266 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 GALNTL6Q49A17 601 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 TMEM201Q5SNT2 666 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 NCMAPQ5T1S8 102 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 HMBOX1Q6NT76 420 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 NUFIP2Q7Z417 695 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 ZAR1Q86SH2 424 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 CDRT4Q8N9R6 151 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 SLC16A11Q8NCK7 471 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 FBXO30Q8TB52 745 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 SMAP2Q8WU79 429 aaPredicted RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 NEUROG1Q92886 237 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 GTPBP3Q969Y2 492 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 REXO5Q96IC2 774 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 METTL2AQ96IZ6 378 aaKnown RBP13.91□□□□□ -0.18
SRRT-209ENST00000474896 PPP3R2Q96LZ3 170 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 MEAF6Q9HAF1 191 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 FGFR1OP2Q9NVK5 253 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 GIMAP2Q9UG22 337 aa13.91□□□□□ -0.18
SRRT-209ENST00000474896 FREM1Q5H8C1 2179 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 SDHDO14521 159 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 PEX11AO75192 247 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 GCM2O75603 506 aaPredicted RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 TP53P04637 393 aaPredicted RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 CD3EP07766 207 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 DANCRP0C864 163 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms