RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 C17orf47Q8NEP4 570 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 OR4D9Q8NGE8 314 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 OR52I1Q8NGK6 324 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 EDAQ92838 391 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LCORQ96JN0 433 aaPredicted RBP20.07■□□□□ 0.8
CCM2-206ENST00000474617 YIPF2Q9BWQ6 316 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 MMP27Q9H306 513 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 UBQLN3Q9H347 655 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CAPN10Q9HC96 672 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CACNA1EQ15878 2313 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 NPIPA5A0A0B4J1W7 369 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 NPIPA7E9PJI5 369 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LAMTOR5O43504 91 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CSTAP01040 98 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CYC1P08574 325 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 HBQ1P09105 142 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 NPIPA8P0DM63 369 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 FOLR1P15328 257 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 SLC9A3P48764 834 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 ENTPD1P49961 510 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LIMK1P53667 647 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 MLLT1Q03111 559 aaPredicted RBP20.07■□□□□ 0.8
CCM2-206ENST00000474617 ALG10BQ5I7T1 473 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 ARHGAP40Q5TG30 622 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 RHBDD2Q6NTF9 364 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 SMARCD3Q6STE5 483 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 BPHLQ86WA6 291 aaPredicted RBP20.07■□□□□ 0.8
CCM2-206ENST00000474617 METTL27Q8N6F8 245 aaPredicted RBP20.07■□□□□ 0.8
CCM2-206ENST00000474617 ZNF614Q8N883 585 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 PLPP5Q8NEB5 264 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 FAM71CQ8NEG0 241 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CEP76Q8TAP6 659 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 SAP25Q8TEE9 199 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 DCSTAMPQ9H295 470 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 OR52D1Q9H346 318 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 HHATLQ9HCP6 504 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 COPS7AQ9UBW8 275 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 MAU2Q9Y6X3 613 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 SCN2AQ99250 2005 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 CLDN25C9JDP6 229 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 HRKO00198 91 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 TO15178 435 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 PIP5K1CO60331 668 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 NADKO95544 446 aaPredicted RBP20.06■□□□□ 0.8
CCM2-206ENST00000474617 GADD45AP24522 165 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 PSMA1P25786 263 aaKnown RBP20.06■□□□□ 0.8
CCM2-206ENST00000474617 CAPZA2P47755 286 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 RFX3P48380 749 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 CDH11P55287 796 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 RTL4Q6ZR62 310 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 PSD4Q8NDX1 1056 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 OR4N2Q8NGD1 307 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 OR4Q3Q8NH05 313 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 NDNFQ8TB73 568 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 RNFT2Q96EX2 444 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 PNO1Q9NRX1 252 aaKnown RBP20.06■□□□□ 0.8
CCM2-206ENST00000474617 DTX4Q9Y2E6 619 aa20.06■□□□□ 0.8
CCM2-206ENST00000474617 TMX2-CTNND1H3BSU7 103 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 SCDO00767 359 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 CDC42EP2O14613 210 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 NGFRP08138 427 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 HSMCR30P0CW71 290 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 PNMTP11086 282 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 HPGDP15428 266 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 OR1D4P47884 311 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 NCS1P62166 190 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 PLAURQ03405 335 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 SLC30A6Q6NXT4 461 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 SAMD8Q96LT4 415 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 C12orf10Q9HB07 376 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 MUTYHQ9UIF7 546 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 SIGLEC7Q9Y286 467 aa20.05■□□□□ 0.8
CCM2-206ENST00000474617 EXOGQ9Y2C4 368 aaKnown RBP20.05■□□□□ 0.8
CCM2-206ENST00000474617 BHLHE40O14503 412 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 CSO75390 466 aaKnown RBP20.04■□□□□ 0.8
CCM2-206ENST00000474617 COL5A1P20908 1838 aaPredicted RBP20.04■□□□□ 0.8
CCM2-206ENST00000474617 NR4A1P22736 598 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 SLC6A8P48029 635 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 BMXP51813 675 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 WNT4P56705 351 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 SIGLEC14Q08ET2 396 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 PLK5Q496M5 336 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 CLEC12AQ5QGZ9 265 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 SNAP47Q5SQN1 464 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 HLA-DQA1Q5Y7H0 255 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 WDR88Q6ZMY6 472 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 NUP54Q7Z3B4 507 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 ATCAYQ86WG3 371 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 SLC2A12Q8TD20 617 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 HSPBAP1Q96EW2 488 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 ZC3H10Q96K80 434 aaKnown RBP20.04■□□□□ 0.8
CCM2-206ENST00000474617 OPALINQ96PE5 141 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 OR5M11Q96RB7 305 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 DPH1Q9BZG8 443 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 CMC2Q9NRP2 79 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 INPP5EQ9NRR6 644 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 NDUFB11Q9NX14 153 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 FLRT3Q9NZU0 649 aa20.04■□□□□ 0.8
CCM2-206ENST00000474617 TNRC6BQ9UPQ9 1833 aaKnown RBP20.03■□□□□ 0.8
CCM2-206ENST00000474617 IGLV3-12A0A075B6K2 115 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms