RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CARD8Q9Y2G2 431 aa17.64■□□□□ 0.41
COL9A3-210ENST00000472880 GPR52Q9Y2T5 361 aa17.64■□□□□ 0.41
COL9A3-210ENST00000472880 GTPBP1O00178 669 aaKnown RBP17.63■□□□□ 0.41
COL9A3-210ENST00000472880 SOX30O94993 753 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 PSMB1P20618 241 aaKnown RBP17.63■□□□□ 0.41
COL9A3-210ENST00000472880 ADH6P28332 368 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 SHC1P29353 583 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 RNPS1Q15287 305 aaKnown RBP17.63■□□□□ 0.41
COL9A3-210ENST00000472880 KLHL26Q53HC5 615 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 CBLN3Q6UW01 205 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 CIARTQ8N365 385 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-210ENST00000472880 TMCO5AQ8N6Q1 288 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 FBXO27Q8NI29 283 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 TCP10LQ8TDR4 215 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 ABHD3Q8WU67 409 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 TMEM171Q8WVE6 324 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 MOAP1Q96BY2 351 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 PLPPR2Q96GM1 343 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 PARD6BQ9BYG5 372 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 GPC6Q9Y625 555 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-210ENST00000472880 NAV3Q8IVL0 2385 aa17.63■□□□□ 0.41
COL9A3-210ENST00000472880 SMAD7O15105 426 aaKnown RBP17.62■□□□□ 0.41
COL9A3-210ENST00000472880 CFLARO15519 480 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 OIP5O43482 229 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 LY6G6DO95868 133 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 PRPS1L1P21108 318 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 SOAT1P35610 550 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 PTH2RP49190 550 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 ATP12AP54707 1039 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 C6orf136Q5SQH8 315 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 IL23RQ5VWK5 629 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 KRTCAP2Q8N6L1 136 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 STEAP2Q8NFT2 490 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 C3orf30Q96M34 536 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 TACO1Q9BSH4 297 aaKnown RBP17.62■□□□□ 0.41
COL9A3-210ENST00000472880 SRXN1Q9BYN0 137 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 CXorf56Q9H5V9 222 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 GPATCH2Q9NW75 528 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 KLHL13Q9P2N7 655 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 LGALS13Q9UHV8 139 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 ICAM5Q9UMF0 924 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 DSCAMO60469 2012 aa17.62■□□□□ 0.41
COL9A3-210ENST00000472880 TRIM64A6NGJ6 449 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 TRIM64BA6NI03 449 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ZNF195O14628 629 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 NDUFAF6Q330K2 333 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ALKBH2Q6NS38 261 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 BHLHB9Q6PI77 547 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 TFAP2EQ6VUC0 442 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 FCRLAQ7L513 359 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 MREGQ8N565 214 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ATP6V1C2Q8NEY4 427 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 OR5AK3PQ8NH89 298 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 RFWD2Q8NHY2 731 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ZFP90Q8TF47 636 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 TUBGCP3Q96CW5 907 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 COQ8BQ96D53 544 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ARSGQ96EG1 525 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 OR7D2Q96RA2 312 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ROPN1BQ9BZX4 212 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-210ENST00000472880 BHLHE41Q9C0J9 482 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-210ENST00000472880 ROPN1Q9HAT0 212 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-210ENST00000472880 DTNAQ9Y4J8 743 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 KCNE3Q9Y6H6 103 aa17.61■□□□□ 0.41
COL9A3-210ENST00000472880 HS3ST1O14792 307 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 PLAUP00749 431 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 PRKCAP17252 672 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 SLC7A1P30825 629 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 CCR4P51679 360 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 ZNF844Q08AG5 666 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 SELENBP1Q13228 472 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 MAD2L1Q13257 205 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-210ENST00000472880 TMEM176BQ3YBM2 270 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-210ENST00000472880 TUSC5Q8IXB3 177 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 TOR1AIP2Q8NFQ8 470 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 GPR119Q8TDV5 335 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 NUDT8Q8WV74 236 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 S100PBPQ96BU1 408 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 MRGPRX4Q96LA9 322 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 DUSP26Q9BV47 211 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 HDHD5Q9BXW7 423 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 COQ10BQ9H8M1 238 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 GP6Q9HCN6 339 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 ZDHHC2Q9UIJ5 367 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 RAB21Q9UL25 225 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 ARID1AO14497 2285 aa17.6■□□□□ 0.41
COL9A3-210ENST00000472880 HEATR5AQ86XA9 2040 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 EFNA2O43921 213 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 TMCC2O75069 709 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 PRKD3O94806 890 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 UBL4AP11441 157 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 NID1P14543 1247 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 IL32P24001 234 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 ARRB2P32121 409 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 TOMM34Q15785 309 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-210ENST00000472880 NUFIP2Q7Z417 695 aaKnown RBP17.59■□□□□ 0.41
COL9A3-210ENST00000472880 RIMKLAQ8IXN7 391 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 GABRG1Q8N1C3 465 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms