RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SLCO1B1Q9Y6L6 691 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 PSME4Q14997 1843 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 LRRK1Q38SD2 2015 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RLFQ13129 1914 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 LOC105371242A0A075B767 164 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 A0A1W2PPE3 182 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ACOD1A6NK06 481 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ERVV-2B6SEH9 535 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SPECC1L-ADORA2AF8WAN1 911 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 AIREO43918 545 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 AXLP30530 894 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 HMGCLP35914 325 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NUP62P37198 522 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 FHITP49789 147 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 PKNOX1P55347 436 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RPS8P62241 208 aaKnown RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 ZXDAP98168 799 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 PLOD1Q02809 727 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 SPAG1Q07617 926 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RGS1Q08116 209 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 POM121L1PQ3SYA9 428 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TIGITQ495A1 244 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 WDR25Q64LD2 544 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 PAQR6Q6TCH4 344 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 UNQ6126/PRO20091Q6UXV3 157 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RFPL4BQ6ZWI9 263 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 CENPUQ71F23 418 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 VRK2Q86Y07 508 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 GPALPP1Q8IXQ4 340 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TCAIMQ8N3R3 496 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 OR4D6Q8NGJ1 314 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SLC22A8Q8TCC7 542 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NTN5Q8WTR8 489 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 ELMO1Q92556 727 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TMEM143Q96AN5 459 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NOL4LQ96MY1 436 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 ST6GALNAC5Q9BVH7 336 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SF3B5Q9BWJ5 86 aaKnown RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 FANCEQ9HB96 536 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 LYRM4Q9HD34 91 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ESM1Q9NQ30 184 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ZNF275Q9NSD4 429 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 RBMX2Q9Y388 322 aaKnown RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 SLX4Q8IY92 1834 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 UBR2Q8IWV8 1755 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 CARMIL3Q8ND23 1372 aa2.28□□□□□ -2.05
XRN1-210ENST00000472697 IBTKQ9P2D0 1353 aaPredicted RBP2.28□□□□□ -2.05
XRN1-210ENST00000472697 OR6C74A6NCV1 312 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 OR6C75A6NL08 312 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ZNF99A8MXY4 864 aaPredicted RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 NPIPB9F8W1W9 429 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 EPHB6O15197 1021 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 CASC3O15234 703 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 NEMFO60524 1076 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 RAMP3O60896 148 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 IGSF6O95976 241 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 OTCP00480 354 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 PRKCGP05129 697 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 CRYGBP07316 175 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 FAM157CP0CG43 387 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ZNF10P21506 573 aaPredicted RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 UGT1A5P35504 534 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 CFHR2P36980 270 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 LINC01547P58512 204 aaPredicted RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 RPL8P62917 257 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 GRB14Q14449 540 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ISXQ2M1V0 245 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 KIF19Q2TAC6 998 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 TECRLQ5HYJ1 363 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 IRAK1BP1Q5VVH5 260 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 SEL1L3Q68CR1 1132 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ASCL4Q6XD76 172 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 RD3Q7Z3Z2 195 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 LUZP2Q86TE4 346 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ZNF575Q86XF7 245 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 NELFCDQ8IXH7 590 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 SELENOHQ8IZQ5 122 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 LRRC75AQ8NAA5 344 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 OR10H4Q8NGA5 316 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 OR5AU1Q8NGC0 362 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 DDI1Q8WTU0 396 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ASZ1Q8WWH4 475 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 CERS2Q96G23 380 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 SCAND2PQ9GZW5 306 aaPredicted RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 NAA50Q9GZZ1 169 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 RETNQ9HD89 108 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 NUDT4Q9NZJ9 180 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 FBXL4Q9UKA2 621 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 PRDM4Q9UKN5 801 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 PHF3Q92576 2039 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 FLT4P35916 1363 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 COL1A1P02452 1464 aaPredicted RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 TULP2O00295 520 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 BCKDKO14874 412 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 TSPAN2O60636 221 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 RBMXL2O75526 392 aaKnown RBP2.27□□□□□ -2.05
XRN1-210ENST00000472697 H6PDO95479 791 aa2.27□□□□□ -2.05
XRN1-210ENST00000472697 ANGPTL1O95841 491 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms