RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PP2D1A8MPX8 630 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 MMP23AO75900 390 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 AK1P00568 194 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 IGHV3-48P01763 117 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 GCFC2P16383 781 aaKnown RBP3.77□□□□□ -1.81
CLK1-209ENST00000472679 MGMTP16455 207 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 TNNI3P19429 210 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 EPHX2P34913 555 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 WNT4P56705 351 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 NUCB2P80303 420 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 HTD2P86397 168 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 EWSR1Q01844 656 aaKnown RBP eCLIP3.77□□□□□ -1.81
CLK1-209ENST00000472679 SLC5A12Q1EHB4 618 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 ZNF530Q6P9A1 599 aaPredicted RBP3.77□□□□□ -1.81
CLK1-209ENST00000472679 DNM1P46Q6ZS02 220 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 Q6ZVH6 145 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 MS4A14Q96JA4 679 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 SMIM14Q96QK8 99 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 U3KQV3 271 aa3.77□□□□□ -1.81
CLK1-209ENST00000472679 PPIAL4CA0A0B4J2A2 164 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 CTAGE5O15320 804 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 CSF2P04141 144 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 PPIAL4GP0DN37 164 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 NCF1P14598 390 aaPredicted RBP3.76□□□□□ -1.81
CLK1-209ENST00000472679 TPSB2P20231 275 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 RIPPLY1Q0D2K3 151 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 CUL1Q13616 776 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 TPSAB1Q15661 275 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 SULT1C3Q6IMI6 304 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 FAHD2BQ6P2I3 314 aaPredicted RBP3.76□□□□□ -1.81
CLK1-209ENST00000472679 IGFL2Q6UWQ7 119 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 APTXQ7Z2E3 356 aaKnown RBP3.76□□□□□ -1.81
CLK1-209ENST00000472679 LCA5Q86VQ0 697 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 ALLCQ8N6M5 410 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 FAHD2AQ96GK7 314 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 C4orf36Q96KX1 117 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 HES7Q9BYE0 225 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 SRXN1Q9BYN0 137 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 CRNKL1Q9BZJ0 848 aaKnown RBP3.76□□□□□ -1.81
CLK1-209ENST00000472679 B3GNT2Q9NY97 397 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 GSTK1Q9Y2Q3 226 aa3.76□□□□□ -1.81
CLK1-209ENST00000472679 CLDN5O00501 218 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ZNF264O43296 627 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 NEBLO76041 1014 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 CALCBP10092 127 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 NTSP30990 170 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 BTDP43251 543 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 RAB40BQ12829 278 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ORC2Q13416 577 aaPredicted RBP3.75□□□□□ -1.81
CLK1-209ENST00000472679 CAPRIN1Q14444 709 aaKnown RBP3.75□□□□□ -1.81
CLK1-209ENST00000472679 CFAP221Q4G0U5 840 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 TMEM41BQ5BJD5 291 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 FAM220AQ7Z4H9 259 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ZNF100Q8IYN0 542 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 PAQR8Q8TEZ7 354 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 AENQ8WTP8 325 aaKnown RBP3.75□□□□□ -1.81
CLK1-209ENST00000472679 C7orf33Q8WU49 177 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 RNF138Q8WVD3 245 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ANKRD49Q8WVL7 239 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ELSPBP1Q96BH3 223 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 SLC6A7Q99884 636 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 MEAF6Q9HAF1 191 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 NANSQ9NR45 359 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 CD274Q9NZQ7 290 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 LCMT1Q9UIC8 334 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 SCML2Q9UQR0 700 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 ATP10DQ9P241 1426 aa3.75□□□□□ -1.81
CLK1-209ENST00000472679 A0A1B0GWB2 263 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 SULT2B1O00204 365 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 CLDN3O15551 220 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 CA1P00915 261 aaPredicted RBP3.74□□□□□ -1.81
CLK1-209ENST00000472679 HPNP05981 417 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 ZNF133P52736 654 aaPredicted RBP3.74□□□□□ -1.81
CLK1-209ENST00000472679 ZNF630Q2M218 657 aaPredicted RBP3.74□□□□□ -1.81
CLK1-209ENST00000472679 LIPNQ5VXI9 398 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 KIAA1328Q86T90 577 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 CENPLQ8N0S6 344 aaPredicted RBP3.74□□□□□ -1.81
CLK1-209ENST00000472679 TMEM252Q8N6L7 170 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 C15orf54Q8N8G6 183 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 DENND6BQ8NEG7 585 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 OR51G2Q8NGK0 314 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 CCDC110Q8TBZ0 833 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 TAF4BQ92750 862 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 MYLPFQ96A32 169 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 ZNF416Q9BWM5 594 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 COQ10BQ9H8M1 238 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 AURKCQ9UQB9 309 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 PLLPQ9Y342 182 aa3.74□□□□□ -1.81
CLK1-209ENST00000472679 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 SUPT7LO94864 414 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 IFNB1P01574 187 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 TBXA2RP21731 343 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 GABRR1P24046 479 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 PSMA2P25787 234 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 CD80P33681 288 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 ACADVLP49748 655 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 TLE4Q04727 773 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 EOGTQ5NDL2 527 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 ZNF573Q86YE8 665 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms