RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 NXF3Q9H4D5 531 aaKnown RBP4.26□□□□□ -1.73
SGCE-210ENST00000472326 KLK12Q9UKR0 248 aa4.26□□□□□ -1.73
SGCE-210ENST00000472326 ANGPTL2Q9UKU9 493 aa4.26□□□□□ -1.73
SGCE-210ENST00000472326 RNF6Q9Y252 685 aa4.26□□□□□ -1.73
SGCE-210ENST00000472326 PRG3Q9Y2Y8 225 aaPredicted RBP4.26□□□□□ -1.73
SGCE-210ENST00000472326 PLEKHG1Q9ULL1 1385 aa4.26□□□□□ -1.73
SGCE-210ENST00000472326 SDHDO14521 159 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 STX7O15400 261 aaKnown RBP4.25□□□□□ -1.73
SGCE-210ENST00000472326 AKR7A3O95154 331 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 THRBP10828 461 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 STMN1P16949 149 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 HTR1EP28566 365 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 NUP107P57740 925 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 LAGE3Q14657 143 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 MPPED2Q15777 294 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 MAPK6Q16659 721 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 ANKRD37Q7Z713 158 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 CBWD2Q8IUF1 395 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 MISPQ8IVT2 679 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 MRPL43Q8N983 215 aaKnown RBP4.25□□□□□ -1.73
SGCE-210ENST00000472326 ZNF740Q8NDX6 193 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 OR5AU1Q8NGC0 362 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 SLC35E1Q96K37 410 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 FAM111AQ96PZ2 611 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 CRNKL1Q9BZJ0 848 aaKnown RBP4.25□□□□□ -1.73
SGCE-210ENST00000472326 VAT1LQ9HCJ6 419 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 NGBQ9NPG2 151 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 PLLPQ9Y342 182 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 CDH10Q9Y6N8 788 aa4.25□□□□□ -1.73
SGCE-210ENST00000472326 A0A1B0GUA9 196 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 RASGRF2O14827 1237 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 VPS26AO75436 327 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 GCFC2P16383 781 aaKnown RBP4.24□□□□□ -1.73
SGCE-210ENST00000472326 AXLP30530 894 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 CTRLP40313 264 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 ATXN7L3Q14CW9 347 aaPredicted RBP4.24□□□□□ -1.73
SGCE-210ENST00000472326 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 ASPHD2Q6ICH7 369 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 ACSM5Q6NUN0 579 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 RBM43Q6ZSC3 357 aaKnown RBP4.24□□□□□ -1.73
SGCE-210ENST00000472326 SUMF2Q8NBJ7 301 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 SRSF12Q8WXF0 261 aaKnown RBP4.24□□□□□ -1.73
SGCE-210ENST00000472326 MYDGFQ969H8 173 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 ARHGDIGQ99819 225 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 CITED1Q99966 193 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 SLC30A2Q9BRI3 323 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 SRXN1Q9BYN0 137 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 APMAPQ9HDC9 416 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 WRAP73Q9P2S5 460 aaPredicted RBP4.24□□□□□ -1.73
SGCE-210ENST00000472326 ATXN10Q9UBB4 475 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 MGAT4BQ9UQ53 548 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 SMC3Q9UQE7 1217 aa4.24□□□□□ -1.73
SGCE-210ENST00000472326 COL4A4P53420 1690 aaPredicted RBP4.23□□□□□ -1.73
SGCE-210ENST00000472326 NPIPB7O75200 414 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 SEC22BO75396 215 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 F10P00742 488 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 CLUP10909 449 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 TOP1P11387 765 aaKnown RBP4.23□□□□□ -1.73
SGCE-210ENST00000472326 HSF2Q03933 536 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 FAM199XQ6PEV8 388 aaPredicted RBP4.23□□□□□ -1.73
SGCE-210ENST00000472326 UNQ9370/PRO34162Q6UXP9 181 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
SGCE-210ENST00000472326 OR1E3Q8WZA6 343 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 VPS35Q96QK1 796 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 NRTNQ99748 197 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 GSDMCQ9BYG8 508 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 MAGT1Q9H0U3 335 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 ZDHHC11Q9H8X9 412 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 SH2D2AQ9NP31 389 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 CACNG2Q9Y698 323 aa4.23□□□□□ -1.73
SGCE-210ENST00000472326 THSD7BQ9C0I4 1608 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 ESYT2A0FGR8 921 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 PSMB11A5LHX3 300 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 DNAJB1P25685 340 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 DPP4P27487 766 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 RPS10P46783 165 aaKnown RBP4.22□□□□□ -1.73
SGCE-210ENST00000472326 NAPAP54920 295 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 SLC10A7Q0GE19 358 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 CUL1Q13616 776 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 DNAJC21Q5F1R6 531 aaKnown RBP4.22□□□□□ -1.73
SGCE-210ENST00000472326 LIPNQ5VXI9 398 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 HDDC3Q8N4P3 179 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 ARIH2OSQ8N7S6 290 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 NANPQ8TBE9 248 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 SLC5A11Q8WWX8 675 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 SELENOMQ8WWX9 145 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 CCDC47Q96A33 483 aaKnown RBP4.22□□□□□ -1.73
SGCE-210ENST00000472326 MBOAT4Q96T53 435 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 HSD3B7Q9H2F3 369 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 DHX33Q9H6R0 707 aaKnown RBP4.22□□□□□ -1.73
SGCE-210ENST00000472326 ECT2Q9H8V3 914 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 PIN4Q9Y237 131 aaKnown RBP4.22□□□□□ -1.73
SGCE-210ENST00000472326 OARD1Q9Y530 152 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 GTF3C1Q12789 2109 aa4.22□□□□□ -1.73
SGCE-210ENST00000472326 TTC21BQ7Z4L5 1316 aa4.21□□□□□ -1.73
SGCE-210ENST00000472326 KRT87PA6NCN2 255 aa4.21□□□□□ -1.74
SGCE-210ENST00000472326 PP2D1A8MPX8 630 aa4.21□□□□□ -1.74
SGCE-210ENST00000472326 RSPH10B2B2RC85 870 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms