RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 COL28A1Q2UY09 1125 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 GALNTL5Q7Z4T8 443 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 SULF2Q8IWU5 870 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 STMN2Q93045 179 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 JSRP1Q96MG2 331 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-203ENST00000471658 MCHR1Q99705 422 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 TUBA8Q9NY65 449 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-203ENST00000471658 FBXL2Q9UKC9 423 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 CPSF4LA6NMK7 179 aaKnown RBP17.49■□□□□ 0.39
PSPC1-203ENST00000471658 H0Y3Z8 333 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 CDK2AP1O14519 115 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 TRIM3O75382 744 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ITGB2P05107 769 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 MAGEA2P43356 314 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 EPS8Q12929 822 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 TOMM34Q15785 309 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ZSWIM7Q19AV6 140 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF766Q5HY98 468 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 MISPQ8IVT2 679 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 GNRHR2Q96P88 292 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF300Q96RE9 604 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-203ENST00000471658 PRORYQ9H606 182 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 EXOSC3Q9NQT5 275 aaKnown RBP17.49■□□□□ 0.39
PSPC1-203ENST00000471658 SDHAF3Q9NRP4 125 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ARMC1Q9NVT9 282 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 RHCGQ9UBD6 479 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 ENPP4Q9Y6X5 453 aa17.49■□□□□ 0.39
PSPC1-203ENST00000471658 PCNX3Q9H6A9 2034 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 FFAR1O14842 300 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 PEX1O43933 1283 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 NME2P1O60361 137 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 CDC40O60508 579 aaKnown RBP eCLIP17.48■□□□□ 0.39
PSPC1-203ENST00000471658 WISP1O95388 367 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 FAM87AP0C7U9 286 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 CD46P15529 392 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 NME2P22392 152 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 P2RX1P51575 399 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 PIN1Q13526 163 aaPredicted RBP17.48■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF550Q7Z398 422 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 PIWIL3Q7Z3Z3 882 aaKnown RBP17.48■□□□□ 0.39
PSPC1-203ENST00000471658 ZADH2Q8N4Q0 377 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 OR2M7Q8NG81 312 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 OR2M3Q8NG83 312 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 OR5W2Q8NH69 310 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 PHF10Q8WUB8 498 aaKnown RBP17.48■□□□□ 0.39
PSPC1-203ENST00000471658 LRTOMTQ8WZ04 291 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 POP5Q969H6 163 aaKnown RBP17.48■□□□□ 0.39
PSPC1-203ENST00000471658 SCMH1Q96GD3 660 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 C5orf34Q96MH7 638 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 TP53TG5Q9Y2B4 290 aa17.48■□□□□ 0.39
PSPC1-203ENST00000471658 IGLV3-32A0A0A0MS00 114 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 SNPHO15079 494 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 SNX4O95219 450 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 LINGO3P0C6S8 592 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ENDOUP21128 410 aaKnown RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 RFC3P40938 356 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 MASP1P48740 699 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 FOXO1Q12778 655 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 GANABQ14697 944 aaKnown RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ENTPD8Q5MY95 495 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ZFP1Q6P2D0 407 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 AAGABQ6PD74 315 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 IGFL3Q6UXB1 125 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 PACS2Q86VP3 889 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 PLCZ1Q86YW0 608 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 LILRA2Q8N149 483 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 FADS6Q8N9I5 356 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 GPR119Q8TDV5 335 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 TMEM41AQ96HV5 264 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 MFRPQ9BY79 579 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 A4GNTQ9UNA3 340 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 HEATR5AQ86XA9 2040 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 LRRC3CA6NJW4 275 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 NUDT14O95848 222 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 THY1P04216 161 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 RFPL3SP0C7P2 107 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 IDH2P48735 452 aaKnown RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 PPP1R8Q12972 351 aaKnown RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 OR1Q1Q15612 314 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 TIGD3Q6B0B8 471 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 HMBOX1Q6NT76 420 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ARSKQ6UWY0 536 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 AMIGO2Q86SJ2 522 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 RANBP3LQ86VV4 465 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF440Q8IYI8 595 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 C10orf67Q8IYJ2 551 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 CADM2Q8N3J6 435 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 RBMXL3Q8N7X1 1067 aaKnown RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 TOR1AIP2Q8NFQ8 470 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 OR4K17Q8NGC6 315 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 OR1J4Q8NGS1 313 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 SLC35B4Q969S0 331 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 CNTNAP3BQ96NU0 1288 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 NPAS1Q99742 590 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 PKP2Q99959 881 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 FAM173AQ9BQD7 235 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 CNTNAP3Q9BZ76 1288 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF71Q9NQZ8 489 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-203ENST00000471658 VNN3Q9NY84 501 aa17.47■□□□□ 0.39
PSPC1-203ENST00000471658 KLF13Q9Y2Y9 288 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms