RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 MS4A4EQ96PG1 132 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 TMEM237Q96Q45 408 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 RHNO1Q9BSD3 238 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 RTN4RQ9BZR6 473 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 AMBRA1Q9C0C7 1298 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 CDC42EP4Q9H3Q1 356 aaKnown RBP8.12□□□□□ -1.11
CPSF4-211ENST00000471455 GLIPR2Q9H4G4 154 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 TMEM185BQ9H7F4 350 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 EQTNQ9NQ60 294 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 RRAGDQ9NQL2 400 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-211ENST00000471455 UBQLN4Q9NRR5 601 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 ZDHHC18Q9NUE0 388 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 FBXO34Q9NWN3 711 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 LPAR3Q9UBY5 353 aa8.12□□□□□ -1.11
CPSF4-211ENST00000471455 MAGED1Q9Y5V3 778 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-211ENST00000471455 EXOC1LA0A1B0GW35 172 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 A0A1W2PQD3 144 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 H3BNH8 94 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 RSL1D1O76021 490 aaKnown RBP8.11□□□□□ -1.11
CPSF4-211ENST00000471455 PRKD3O94806 890 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 NKX2-2O95096 273 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 OXSR1O95747 527 aaPredicted RBP8.11□□□□□ -1.11
CPSF4-211ENST00000471455 IGHV4-39P01824 125 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 GSTA1P08263 222 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 SBK3P0C264 359 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 CTAGE8P0CG41 777 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 FAM157CP0CG43 387 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 ACVR1BP36896 505 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 CDKN1AP38936 164 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 PRKAA2P54646 552 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 SUMO3P55854 103 aaPredicted RBP8.11□□□□□ -1.11
CPSF4-211ENST00000471455 SLC7A5Q01650 507 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 BSPH1Q075Z2 132 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 FAPQ12884 760 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 ITGADQ13349 1161 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 TAB1Q15750 504 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 AGAP6Q5VW22 663 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 ZCCHC12Q6PEW1 402 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 CLEC2AQ6UVW9 174 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 TFAP2EQ6VUC0 442 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
CPSF4-211ENST00000471455 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 CTAGE4Q8IX94 777 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 LILRA2Q8N149 483 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 CEP112Q8N8E3 955 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 COX18Q8N8Q8 333 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 ZNF527Q8NB42 609 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 MAPK1IP1LQ8NDC0 245 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 DCAKDQ8WVC6 231 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 ROBO4Q8WZ75 1007 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 PIK3R3Q92569 461 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 MUCL1Q96DR8 90 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 FMO2Q99518 471 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 GRPEL1Q9HAV7 217 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 MID1IP1Q9NPA3 183 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 KLHL9Q9P2J3 617 aa8.11□□□□□ -1.11
CPSF4-211ENST00000471455 A0A0J9YW62 118 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 GXYLT2A0PJZ3 443 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 GCM2O75603 506 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 NUDT14O95848 222 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 C8BP07358 591 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 YES1P07947 543 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 ALOX5P09917 674 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 ATP6V1C1P21283 382 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PSMA4P25789 261 aaKnown RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 SLC7A1P30825 629 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 SFTPDP35247 375 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PRIM2P49643 509 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 NUDT6P53370 316 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 CDH11P55287 796 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PPA1Q15181 289 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 MFSD12Q6NUT3 480 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 NOXRED1Q6NXP6 359 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 APOOLQ6UXV4 268 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 TIFABQ6ZNK6 161 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 FCRLAQ7L513 359 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 BHLHA15Q7RTS1 189 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 GATSQ8NAP1 163 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 KBTBD8Q8NFY9 601 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PIWIL2Q8TC59 973 aaKnown RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 ABHD3Q8WU67 409 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 JADE3Q92613 823 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 HOXB13Q92826 284 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 PPCDCQ96CD2 204 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 SH3YL1Q96HL8 342 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 TRAF4Q9BUZ4 470 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 TRIM2Q9C040 744 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 HOXD1Q9GZZ0 328 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 CISD1Q9NZ45 108 aaKnown RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 TMEM216Q9P0N5 145 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 POLR3HQ9Y535 204 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-211ENST00000471455 TIMM22Q9Y584 194 aa8.1□□□□□ -1.11
CPSF4-211ENST00000471455 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CADP27708 2225 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CR1P17927 2039 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 PHF1O43189 567 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms