RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 FOXD4Q12950 439 aaPredicted RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 TSPAN31Q12999 210 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 MAD2L1BPQ15013 274 aaPredicted RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 PTGES3Q15185 160 aaKnown RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 CD226Q15762 336 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 MEP1AQ16819 746 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 NDUFAF6Q330K2 333 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 C6orf141Q5SZD1 244 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 LAIR2Q6ISS4 152 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 ULK3Q6PHR2 472 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 APOOLQ6UXV4 268 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 WDR88Q6ZMY6 472 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 Q6ZPB1 254 aaPredicted RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 TIPARPQ7Z3E1 657 aaKnown RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 NRMQ8IXM6 262 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 ESX1Q8N693 406 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 DEFB124Q8NES8 71 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 TSPAN14Q8NG11 270 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 FAM81AQ8TBF8 368 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 PHOSPHO1Q8TCT1 267 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 CT55Q8WUE5 264 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 TMEM239Q8WW34 195 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 FAM46AQ96IP4 442 aaKnown RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 MPP4Q96JB8 637 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 IMMP1LQ96LU5 166 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 HS6ST2Q96MM7 605 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 POLR1BQ9H9Y6 1135 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 MMP25Q9NPA2 562 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 TUBA8Q9NY65 449 aaPredicted RBP8.61□□□□□ -1.03
VPS52-216ENST00000471309 FOXJ2Q9P0K8 574 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 TMEM5Q9Y2B1 443 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 NPFFR2Q9Y5X5 522 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 GPR179Q6PRD1 2367 aa8.61□□□□□ -1.03
VPS52-216ENST00000471309 A0A087WXM4 84 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 C21orf140B9A014 251 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 H3BN98 237 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 SOCS6O14544 535 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 FADS1O60427 444 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 MPZL2O60487 215 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 EIF4E2O60573 245 aaKnown RBP8.6□□□□□ -1.03
VPS52-216ENST00000471309 SMNDC1O75940 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
VPS52-216ENST00000471309 SOX14O95416 240 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 ANGPTL1O95841 491 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CLPTM1O96005 669 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 FTH1P19P0C7X4 201 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CSRP1P21291 193 aaKnown RBP8.6□□□□□ -1.03
VPS52-216ENST00000471309 CRHBPP24387 322 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 EVI2BP34910 448 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 STAT5AP42229 794 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 SLC6A8P48029 635 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CTBP2P56545 445 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CDC42P60953 191 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 COPZ1P61923 177 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 ZNF117Q03924 483 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 PRKCDQ05655 676 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 ALG10BQ5I7T1 473 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 C3orf38Q5JPI3 329 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 FAM69BQ5VUD6 431 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 BROXQ5VW32 411 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 C12orf73Q69YU5 71 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 PLAG1Q6DJT9 500 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 KIRREL2Q6UWL6 708 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 LINC00114Q6XXX2 140 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 RASSF6Q6ZTQ3 369 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 PPP1R32Q7Z5V6 425 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 MISPQ8IVT2 679 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CLDN22Q8N7P3 220 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 GATSQ8NAP1 163 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 OR11G2Q8NGC1 345 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CNIH3Q8TBE1 160 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 M1APQ8TC57 530 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 SLC22A8Q8TCC7 542 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 GRHL3Q8TE85 626 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 RNF138Q8WVD3 245 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 DNAJA4Q8WW22 397 aaPredicted RBP8.6□□□□□ -1.03
VPS52-216ENST00000471309 APH1BQ8WW43 257 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 TTC9Q92623 222 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 HGDQ93099 445 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 NACC2Q96BF6 587 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 GPA33Q99795 319 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 DEFB126Q9BYW3 111 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 TBL1XR1Q9BZK7 514 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 LAT2Q9GZY6 243 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 SLC25A19Q9HC21 320 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 IMPAD1Q9NX62 359 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 SELENONQ9NZV5 590 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 CNIH4Q9P003 139 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 MYOTQ9UBF9 498 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 RPS6KB2Q9UBS0 482 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 RNF6Q9Y252 685 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 MED31Q9Y3C7 131 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 LAMA1P25391 3075 aa8.6□□□□□ -1.03
VPS52-216ENST00000471309 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms