RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RPS9P46781 194 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 MTTPP55157 894 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SH3BGRP55822 239 aaPredicted RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 PRPS1P60891 318 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ACTA1P68133 377 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CSNK1G2P78368 415 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ARF5P84085 180 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 BDH1Q02338 343 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 WASHC5Q12768 1159 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 RPA4Q13156 261 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SLAQ13239 276 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SNX1Q13596 522 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ARFRP1Q13795 201 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 RABGAP1LQ5R372 815 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CASC10Q5T4H9 136 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ATF7IP2Q5U623 682 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 LIPNQ5VXI9 398 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SCYL2Q6P3W7 929 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM184AQ6ZMB5 413 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 C1orf186Q6ZWK4 172 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ARMCX2Q7L311 632 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CCDC91Q7Z6B0 441 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 IQCA1Q86XH1 822 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 VRK2Q86Y07 508 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CNTN4Q8IWV2 1026 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SAXO1Q8IYX7 474 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 BATF2Q8N1L9 274 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 EXOC6Q8TAG9 804 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 M1APQ8TC57 530 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SLC22A8Q8TCC7 542 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SLC5A11Q8WWX8 675 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 IL1F10Q8WWZ1 152 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM158Q8WZ71 300 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SDSLQ96GA7 329 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 FOPNLQ96NB1 174 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CYP2S1Q96SQ9 504 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 FEM1AQ9BSK4 669 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SRXN1Q9BYN0 137 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 POLR2J2Q9GZM3 115 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 COMMD4Q9H0A8 199 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 POLR2J3Q9H1A7 115 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 POLR3FQ9H1D9 316 aaPredicted RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CYP39A1Q9NYL5 469 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 C6orf203Q9P0P8 240 aaPredicted RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 HMG20BQ9P0W2 317 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 P2RX2Q9UBL9 471 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TRIM10Q9UDY6 481 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 MTRF1LQ9UGC7 380 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 IL20RAQ9UHF4 553 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CYTH4Q9UIA0 394 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 CRLS1Q9UJA2 301 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TBX21Q9UL17 535 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 PRPF19Q9UMS4 504 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ERVW-1Q9UQF0 538 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TP53TG5Q9Y2B4 290 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 PLLPQ9Y342 182 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 UGT2A1Q9Y4X1 527 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 DHX29Q7Z478 1369 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ESYT2A0FGR8 921 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RNF222A6NCQ9 220 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 WASHC1A8K0Z3 465 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PP2D1A8MPX8 630 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PES1O00541 588 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 FAM189A1O60320 539 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 OR10H3O60404 316 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 MED6O75586 246 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 KIAA0754O94854 1291 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SLITRK3O94933 977 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SNAPINO95295 136 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SLC25A27O95847 323 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 MOSP00540 346 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 IGKV1-17P01599 117 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CSF2P04141 144 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PCCBP05166 539 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PLEKP08567 350 aaPredicted RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ALPPL2P10696 532 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PDHBP11177 359 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RALAP11233 206 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SERPINA2P20848 420 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 COX7A1P24310 79 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 OAS2P29728 719 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 MNAT1P51948 309 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF136P52737 540 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RGS1Q08116 209 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SLC10A7Q0GE19 358 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 FUT7Q11130 342 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 EXOSC2Q13868 293 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PSG5Q15238 335 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CHI3L2Q15782 390 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 XKR4Q5GH76 650 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ETFRF1Q6IPR1 90 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 FAM71E1Q6IPT2 247 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 IGFL1Q6UW32 110 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RFLNAQ6ZTI6 216 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CYS1Q717R9 158 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 COX15Q7KZN9 410 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 LPCAT2Q7L5N7 544 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 LRRC70Q7Z2Q7 622 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 VPS36Q86VN1 386 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF695Q8IW36 515 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms