RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 GABRA1P14867 456 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 CCR4P51679 360 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 CLDN18P56856 261 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 FOXF1Q12946 379 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
HDAC7-220ENST00000471235 GNA13Q14344 377 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 ACSF3Q4G176 576 aaPredicted RBP17.86■□□□□ 0.45
HDAC7-220ENST00000471235 TREML1Q86YW5 311 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 NFKBIDQ8NI38 313 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 ZBTB8AQ96BR9 441 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 RCN3Q96D15 328 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 PIGQQ9BRB3 760 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 MTHFD2LQ9H903 347 aaPredicted RBP17.86■□□□□ 0.45
HDAC7-220ENST00000471235 ALKBH4Q9NXW9 302 aa17.86■□□□□ 0.45
HDAC7-220ENST00000471235 INTS1Q8N201 2190 aaKnown RBP17.86■□□□□ 0.45
HDAC7-220ENST00000471235 A0A0G2JPF8 293 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 KDM4EB2RXH2 506 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 HNRNPCL2B2RXH8 293 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 HNRNPCL3B7ZW38 293 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 HNRNPCL1O60812 293 aaKnown RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 CYP7B1O75881 506 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 NUDT14O95848 222 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 HNRNPCL4P0DMR1 293 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 CPN1P15169 458 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 ZNF708P17019 499 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 POU3F2P20265 443 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 NUP107P57740 925 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 KCNJ10P78508 379 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 SPTBN1Q01082 2364 aaKnown RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 PTPN13Q12923 2485 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 TOMM34Q15785 309 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 PRAMEF8Q5VWM4 474 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 PRAMEF7Q5VXH5 474 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 B3GNT6Q6ZMB0 384 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 PIGWQ7Z7B1 504 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 CMIPQ8IY22 773 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 PEX5LQ8IYB4 626 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 GTPBP8Q8N3Z3 284 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 OR5W2Q8NH69 310 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 BBS10Q8TAM1 723 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 POC1BQ8TC44 478 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 GPR119Q8TDV5 335 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 ITLN2Q8WWU7 325 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-220ENST00000471235 ZNF524Q96C55 264 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 LRRC58Q96CX6 371 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 RNF145Q96MT1 663 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 TMEM38AQ9H6F2 299 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 BCL2L10Q9HD36 194 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 ZNF337Q9Y3M9 751 aa17.85■□□□□ 0.45
HDAC7-220ENST00000471235 HCFC1P51610 2035 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 AHRRA9YTQ3 701 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 C5orf58C9J3I9 102 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 H0Y3Z8 333 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 H3BML4 177 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 DNAJA2O60884 412 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 COX4I1P13073 169 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 NID1P14543 1247 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 PSMA4P25789 261 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 PTGER4P35408 488 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 CDK6Q00534 326 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 SRYQ05066 204 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 CBFBQ13951 182 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 ADRM1Q16186 407 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 LIN52Q52LA3 116 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 MRPL2Q5T653 305 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 RPTNQ6XPR3 784 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 ZNF836Q6ZNA1 936 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 VRK2Q86Y07 508 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 PTOV1Q86YD1 416 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 OR52P1PQ8NH57 321 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 RP9Q8TA86 221 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 CNOT9Q92600 299 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 TTYH2Q9BSA4 534 aa17.84■□□□□ 0.45
HDAC7-220ENST00000471235 THUMPD3Q9BV44 507 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 EXOSC3Q9NQT5 275 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 DNAJB12Q9NXW2 375 aaKnown RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 ZNF443Q9Y2A4 671 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-220ENST00000471235 LINC01387J3KSC0 135 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SHOX2O60902 331 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-220ENST00000471235 PGM3O95394 542 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 HOXD4P09016 255 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-220ENST00000471235 GLI4P10075 376 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 PEPDP12955 493 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 IL7RP16871 459 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 PRKCAP17252 672 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SCARB2Q14108 478 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 QPRTQ15274 297 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 BCL2A1Q16548 175 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 CYP51A1Q16850 503 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 TMEM211Q6ICI0 200 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 NANOGP8Q6NSW7 305 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SEM1Q6ZVN7 128 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 NET1Q7Z628 596 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-220ENST00000471235 UBQLNLQ8IYU4 475 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 METTL25Q8N6Q8 603 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 PCYOX1LQ8NBM8 494 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SMPDL3BQ92485 455 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 TUBA1CQ9BQE3 449 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 KAT8Q9H7Z6 458 aaKnown RBP17.83■□□□□ 0.44
HDAC7-220ENST00000471235 NANOGQ9H9S0 305 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms