RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TMIGD3P0DMS9 266 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 BMP2P12643 396 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CPN1P15169 458 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NAGAP17050 411 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 SSTR4P31391 388 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 SOX18P35713 384 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 PRIM2P49643 509 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 KHKP50053 298 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 AGFG1P52594 562 aaKnown RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NRG3P56975 720 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NKX6-1P78426 367 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 MRPS35P82673 323 aaKnown RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 SELPLGQ14242 412 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 RGNQ15493 299 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 TRMT12Q53H54 448 aaKnown RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 EIPR1Q53HC9 387 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 WIPI1Q5MNZ9 446 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 TIGD3Q6B0B8 471 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 ANGPTL8Q6UXH0 198 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CLEC9AQ6UXN8 241 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 C6orf120Q7Z4R8 191 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NET1Q7Z628 596 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 SERPINA11Q86U17 422 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CXorf67Q86X51 503 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CLEC4FQ8N1N0 589 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF615Q8N8J6 731 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 C9orf106Q8NAJ2 232 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NUP43Q8NFH3 380 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 OR7G1Q8NGA0 311 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 MIPOL1Q8TD10 442 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 ABTB1Q969K4 478 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 UCN2Q96RP3 112 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 ALG2Q9H553 416 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 GPATCH2Q9NW75 528 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 THUMPD1Q9NXG2 353 aaKnown RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 GALNT8Q9NY28 637 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 PRODH2Q9UF12 536 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CD300AQ9UGN4 299 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 FAF1Q9UNN5 650 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CFL2Q9Y281 166 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PRORSD1PA6NEY8 169 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 DUXAA6NLW8 204 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 FAM220BPB1ANY3 271 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ARHGEF9O43307 516 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PPM1BO75688 479 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 RCBTB2O95199 551 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CBX7O95931 251 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 AGR2O95994 175 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 HMGN2P05204 90 aaKnown RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CYP4B1P13584 511 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 NQO1P15559 274 aaKnown RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 S1PR1P21453 382 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 MATN1P21941 496 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ME2P23368 584 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ABCD3P28288 659 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CRATP43155 626 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PCYT1AP49585 367 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 GSK3BP49841 420 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 MVDP53602 400 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PRKAG1P54619 331 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 DSTNP60981 165 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 LIPEQ05469 1076 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 RBBP4Q09028 425 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 FOXF2Q12947 444 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 BNIP2Q12982 314 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CEACAM7Q14002 265 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 LASP1Q14847 261 aaKnown RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CYP51A1Q16850 503 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 GCNT6Q5T4J0 391 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 MFSD12Q6NUT3 480 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CDC73Q6P1J9 531 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ERICH5Q6P6B1 374 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PGM2L1Q6PCE3 622 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 Q71RC1 249 aaPredicted RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CALHM3Q86XJ0 350 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 RNF130Q86XS8 419 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 LRRC75A-AS1Q8N1F1 130 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 CDRT4Q8N9R6 151 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 FAM83FQ8NEG4 500 aaPredicted RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 OR2T12Q8NG77 320 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 OR52R1Q8NGF1 315 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 OR1J4Q8NGS1 313 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 OR10A6Q8NH74 314 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PNPT1Q8TCS8 783 aaKnown RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 GIMAP5Q96F15 307 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 REXO5Q96IC2 774 aaKnown RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 COX4I2Q96KJ9 171 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF583Q96ND8 569 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 PIP5K1AQ99755 562 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 TM9SF2Q99805 663 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 KCTD14Q9BQ13 255 aaPredicted RBP8.21□□□□□ -1.1
SF3A1-206ENST00000471037 ACTRT3Q9BYD9 372 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 OR10A5Q9H207 317 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 MUC13Q9H3R2 512 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 TMEM38AQ9H6F2 299 aa8.21□□□□□ -1.1
SF3A1-206ENST00000471037 BCAP29Q9UHQ4 241 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms