RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 OR56A1Q8NGH5 318 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 RFWD2Q8NHY2 731 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 PSMA8Q8TAA3 256 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 ABHD3Q8WU67 409 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.513e-10■■■■■ 88.3
CPSF4-210ENST00000469897 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 PRPF18Q99633 342 aaKnown RBP11.84□□□□□ -0.51
CPSF4-210ENST00000469897 SRXN1Q9BYN0 137 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 TIGARQ9NQ88 270 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 ATAD3AQ9NVI7 634 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 EXPH5Q8NEV8 1989 aa11.84□□□□□ -0.51
CPSF4-210ENST00000469897 FAM171A2A8MVW0 826 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 C9JVG2 144 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 LYPLA1O75608 230 aaPredicted RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 PRKD3O94806 890 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 NID1P14543 1247 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 PSMB1P20618 241 aaKnown RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ENPP1P22413 925 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ADH6P28332 368 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 PTH2RP49190 550 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 NR1H2P55055 460 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 RNPS1Q15287 305 aaKnown RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 PGS1Q32NB8 556 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 RIMKLAQ8IXN7 391 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 NATD1Q8N6N6 113 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 OR5D16Q8NGK9 328 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 RNF128Q8TEB7 428 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 IGFBPL1Q8WX77 278 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 TUBGCP3Q96CW5 907 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 OR7D2Q96RA2 312 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 DUSP26Q9BV47 211 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 GSX2Q9BZM3 304 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 DTNAQ9Y4J8 743 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 GPC6Q9Y625 555 aaPredicted RBP11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ABCA4P78363 2273 aa11.83□□□□□ -0.52
CPSF4-210ENST00000469897 ACANP16112 2415 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 MPDZO75970 2070 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 IGHV3-15A0A0B4J1V0 119 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 A0A1W2PNR3 127 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 GJE1A6NN92 205 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 NPIPB9F8W1W9 429 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 FCMRO60667 390 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 GCM2O75603 506 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 SOX30O94993 753 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 ADAP00813 363 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 BPGMP07738 259 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 YES1P07947 543 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 NUDT17P0C025 328 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 G6PDP11413 515 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 PRKCAP17252 672 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 PRPS1L1P21108 318 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 MATN1P21941 496 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 RPS26P62854 115 aaKnown RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 HBA1P69905 142 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 GPR68Q15743 365 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 SFRP5Q5T4F7 317 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 FCRLAQ7L513 359 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 OLIG3Q7RTU3 272 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 C6orf120Q7Z4R8 191 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 GABRG1Q8N1C3 465 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 RIBC1Q8N443 379 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 STEAP2Q8NFT2 490 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 OR5W2Q8NH69 310 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 RAB3IL1Q8TBN0 382 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 AKAP1Q92667 903 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 CPNE4Q96A23 557 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 PPP1R36Q96LQ0 422 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 DOCK7Q96N67 2140 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 SDF2Q99470 211 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 TMEM204Q9BSN7 226 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 OR10A4Q9H209 315 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 L2HGDHQ9H9P8 463 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-210ENST00000469897 KLHL13Q9P2N7 655 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 LGALS13Q9UHV8 139 aa11.82□□□□□ -0.52
CPSF4-210ENST00000469897 WDR91A4D1P6 747 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ESPNB1AK53 854 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF814B7Z6K7 855 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 HS3ST1O14792 307 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF264O43296 627 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ITM2AO43736 263 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 EIF4E2O60573 245 aaKnown RBP11.81□□□□□ -0.52
CPSF4-210ENST00000469897 CYP7B1O75881 506 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 KRT16P08779 473 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms