RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LURAP1Q96LR2 239 aa11.53□□□□□ -0.56
USP11-206ENST00000469080 SSX3Q99909 188 aa11.53□□□□□ -0.56
USP11-206ENST00000469080 OR52A5Q9H2C5 316 aa11.53□□□□□ -0.56
USP11-206ENST00000469080 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
USP11-206ENST00000469080 FBXL21Q9UKT6 434 aa11.53□□□□□ -0.56
USP11-206ENST00000469080 PRSS47A8MTI9 375 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 AKAP8O43823 692 aaKnown RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 SOX30O94993 753 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 NR2C1P13056 603 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 PVALBP20472 110 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 BCL6P41182 706 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 ZNF79Q15937 498 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 ZNF57Q68EA5 555 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 TMIEQ8NEW7 156 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 OR11H4Q8NGC9 324 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 ZBED6CLQ96FA7 236 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 VRK1Q99986 396 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 PTDSS2Q9BVG9 487 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 SRRQ9GZT4 340 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 CNIH4Q9P003 139 aa11.52□□□□□ -0.56
USP11-206ENST00000469080 GPN3Q9UHW5 284 aaPredicted RBP11.52□□□□□ -0.56
USP11-206ENST00000469080 M0R082 166 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 TLX2O43763 284 aaPredicted RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 GPR37L1O60883 481 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 TRIM3O75382 744 aaPredicted RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 CSF3P09919 207 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 ZNF888P0CJ79 500 aaPredicted RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 ACVR2AP27037 513 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 CTHP32929 405 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 MAN2A2P49641 1150 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 RIDAP52758 137 aaKnown RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 MPEG1Q2M385 716 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 MINDY4Q4G0A6 757 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 DCST1Q5T197 706 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 Q6ZSR6 202 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 NLRC3Q7RTR2 1065 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 DPPA2Q7Z7J5 298 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 ACOT4Q8N9L9 421 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 IL17RCQ8NAC3 791 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 OR5K2Q8NHB8 316 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 GRHL3Q8TE85 626 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 SLC38A5Q8WUX1 472 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 TEFMQ96QE5 360 aaKnown RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 MS4A12Q9NXJ0 267 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 CD207Q9UJ71 328 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 TRAPPC4Q9Y296 219 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 PPIL1Q9Y3C6 166 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 PLXNA3P51805 1871 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 OR10H2O60403 315 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 DNAJB6O75190 326 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 CCNB2O95067 398 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 PRKAR1AP10644 381 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 CMPK1P30085 196 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 SLC25A25Q6KCM7 469 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 PRSS41Q7RTY9 318 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 NRSN1Q8IZ57 195 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 C10orf53Q8N6V4 93 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 OR1M1Q8NGA1 313 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 NXF2Q9GZY0 626 aaKnown RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.57
USP11-206ENST00000469080 HEXA-AS1Q9H8Q6 139 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 GDE1Q9NZC3 331 aa11.52□□□□□ -0.57
USP11-206ENST00000469080 TRBV4-1A0A0J9YWV2 114 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 ABCD4O14678 606 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 TERTO14746 1132 aaKnown RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 RGS11O94810 467 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 C5AR1P21730 350 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 CNR2P34972 360 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 MLIPQ5VWP3 458 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 OR4C11Q6IEV9 310 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 CDC73Q6P1J9 531 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 OOSP2Q86WS3 158 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 DNASE1L2Q92874 299 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 VOPP1Q96AW1 172 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 OR2M4Q96R27 311 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 MAPKAP1Q9BPZ7 522 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 OR51M1Q9H341 326 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 HCN2Q9UL51 889 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 KCNE3Q9Y6H6 103 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 A0A1B0GWJ7 208 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 GPR37O15354 613 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 CLN5O75503 358 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 DHFRP00374 187 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 ADPRHP54922 357 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 DCDC1P59894 354 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 EXOSC7Q15024 291 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms