RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 KCNK9Q9NPC2 374 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 PLSCR4Q9NRQ2 329 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 GLRX2Q9NS18 164 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 PCDHGB4Q9UN71 923 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 DTNAQ9Y4J8 743 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 CYP7B1O75881 506 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 MATN1P21941 496 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 CASP9P55211 416 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 GPR68Q15743 365 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 GTF2IRD2BQ6EKJ0 949 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 C6orf120Q7Z4R8 191 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 GTF2IRD2Q86UP8 949 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 SLC35G5Q96KT7 338 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 PAIP2Q9BPZ3 127 aaKnown RBP19.48■□□□□ 0.71
TTC28-204ENST00000468807 DPY30Q9C005 99 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 TIGARQ9NQ88 270 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 BEX4Q9NWD9 120 aaPredicted RBP19.48■□□□□ 0.71
TTC28-204ENST00000468807 ICAM5Q9UMF0 924 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 RAP2CQ9Y3L5 183 aa19.48■□□□□ 0.71
TTC28-204ENST00000468807 GJE1A6NN92 205 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 ZNF195O14628 629 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 BIRC5O15392 142 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 TUBBP07437 444 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 ELK4P28324 431 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 SLC1A6P48664 564 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 RPL14P50914 215 aaKnown RBP19.47■□□□□ 0.71
TTC28-204ENST00000468807 SUMO3P55854 103 aaPredicted RBP19.47■□□□□ 0.71
TTC28-204ENST00000468807 C21orf58P58505 322 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 TOMM34Q15785 309 aaPredicted RBP19.47■□□□□ 0.71
TTC28-204ENST00000468807 CEP85LQ5SZL2 805 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 PDZK1Q5T2W1 519 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 STK32CQ86UX6 486 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 ANKRD46Q86W74 232 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 TOR1AIP2Q8NFQ8 470 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 ZIM3Q96PE6 472 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 SDF2Q99470 211 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 C20orf27Q9GZN8 174 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 FANCFQ9NPI8 374 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 ASIC5Q9NY37 505 aa19.47■□□□□ 0.71
TTC28-204ENST00000468807 GPC6Q9Y625 555 aaPredicted RBP19.47■□□□□ 0.71
TTC28-204ENST00000468807 DUXAA6NLW8 204 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 TM9SF1O15321 606 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 ZNF264O43296 627 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 CPSF4O95639 269 aaKnown RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 PABPC4LP0CB38 370 aaKnown RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 UBL4AP11441 157 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 BGNP21810 368 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 AGTR1P30556 359 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 NKX6-1P78426 367 aaPredicted RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 ZNF239Q16600 458 aaKnown RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 SMU1Q2TAY7 513 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 TMEM176BQ3YBM2 270 aaPredicted RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 BEND4Q6ZU67 534 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 C22orf34Q6ZV56 151 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 OLIG3Q7RTU3 272 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 C16orf62Q7Z3J2 963 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 GPR119Q8TDV5 335 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 ABHD3Q8WU67 409 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 CPNE4Q96A23 557 aaPredicted RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 HS3ST6Q96QI5 342 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 SRXN1Q9BYN0 137 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 NUF2Q9BZD4 464 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 SERHL2Q9H4I8 314 aa19.46■□□□□ 0.71
TTC28-204ENST00000468807 SSU72Q9NP77 194 aaKnown RBP19.46■□□□□ 0.71
TTC28-204ENST00000468807 RNASET2O00584 256 aaKnown RBP19.45■□□□□ 0.7
TTC28-204ENST00000468807 PRKCAP17252 672 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 ADH6P28332 368 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 CBFBQ13951 182 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 TMEM201Q5SNT2 666 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 ALKBH2Q6NS38 261 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 STAC2Q6ZMT1 411 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 OR5W2Q8NH69 310 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 SORT1Q99523 831 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 CCL19Q99731 98 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 OR51I1Q9H343 314 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 GSX1Q9H4S2 264 aaPredicted RBP19.45■□□□□ 0.7
TTC28-204ENST00000468807 MKLN1Q9UL63 735 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 ACTL7BQ9Y614 415 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 HEATR5AQ86XA9 2040 aa19.45■□□□□ 0.7
TTC28-204ENST00000468807 SERINC4A6NH21 518 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 NPIPB9F8W1W9 429 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 EFNA2O43921 213 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 EIF4E2O60573 245 aaKnown RBP19.44■□□□□ 0.7
TTC28-204ENST00000468807 FCMRO60667 390 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 SMPD2O60906 423 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 STX11O75558 287 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 AK1P00568 194 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 PPP3CBP16298 524 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 FPR1P21462 350 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 SLC7A1P30825 629 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 STX3Q13277 289 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 QPRTQ15274 297 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 ACKR1Q16570 336 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 CXorf67Q86X51 503 aaPredicted RBP19.44■□□□□ 0.7
TTC28-204ENST00000468807 P3H2Q8IVL5 708 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 VPS37AQ8NEZ2 397 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 OR8J2Q8NGG1 315 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 RNF128Q8TEB7 428 aa19.44■□□□□ 0.7
TTC28-204ENST00000468807 ZFP90Q8TF47 636 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms