RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 OR7D2Q96RA2 312 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 ACTR6Q9GZN1 396 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 SERHL2Q9H4I8 314 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 FAF1Q9UNN5 650 aaPredicted RBP21.83■■□□□ 1.09
PTCH1-210ENST00000468211 H7C1Q1 480 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 LYPLA1O75608 230 aaPredicted RBP21.82■■□□□ 1.08
PTCH1-210ENST00000468211 NUDT14O95848 222 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 LY6G6DO95868 133 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 TUBBP07437 444 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 BPGMP07738 259 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 G6PDP11413 515 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 PPP3CBP16298 524 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 ATP12AP54707 1039 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 RPS26P62854 115 aaKnown RBP21.82■■□□□ 1.08
PTCH1-210ENST00000468211 HBA1P69905 142 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 LSM12Q3MHD2 195 aaKnown RBP21.82■■□□□ 1.08
PTCH1-210ENST00000468211 PDSS1Q5T2R2 415 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 BEND4Q6ZU67 534 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 YTHDF3Q7Z739 585 aaKnown RBP21.82■■□□□ 1.08
PTCH1-210ENST00000468211 CLEC4FQ8N1N0 589 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 SFXN5Q8TD22 340 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 TUBGCP3Q96CW5 907 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 TRIM44Q96DX7 344 aaPredicted RBP21.82■■□□□ 1.08
PTCH1-210ENST00000468211 ARSGQ96EG1 525 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 COX4I2Q96KJ9 171 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 HOXD1Q9GZZ0 328 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 COQ10BQ9H8M1 238 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 ATAD3AQ9NVI7 634 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 ACTL7BQ9Y614 415 aa21.82■■□□□ 1.08
PTCH1-210ENST00000468211 TYROBPO43914 113 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 PRKCAP17252 672 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 PRPS1L1P21108 318 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 ELK4P28324 431 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 SERPINB5P36952 375 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 ETV4P43268 484 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 IFFO1Q0D2I5 559 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 TSC22D1Q15714 1073 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 TMEM176BQ3YBM2 270 aaPredicted RBP21.81■■□□□ 1.08
PTCH1-210ENST00000468211 ZNF704Q6ZNC4 412 aaPredicted RBP21.81■■□□□ 1.08
PTCH1-210ENST00000468211 OLIG3Q7RTU3 272 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 TUSC5Q8IXB3 177 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 ZNF527Q8NB42 609 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 ATP6V1C2Q8NEY4 427 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 AENQ8WTP8 325 aaKnown RBP21.81■■□□□ 1.08
PTCH1-210ENST00000468211 PLPPR2Q96GM1 343 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 DUSP26Q9BV47 211 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 BHLHE41Q9C0J9 482 aaPredicted RBP21.81■■□□□ 1.08
PTCH1-210ENST00000468211 KCNE5Q9UJ90 142 aa21.81■■□□□ 1.08
PTCH1-210ENST00000468211 TRIM64A6NGJ6 449 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 TRIM64BA6NI03 449 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 GTPBP1O00178 669 aaKnown RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 CFLARO15519 480 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 ITM2AO43736 263 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 GCM2O75603 506 aaPredicted RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 PSMB1P20618 241 aaKnown RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 ADH6P28332 368 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 PRSS57Q6UWY2 283 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 CLECL1Q8IZS7 167 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 ZNF614Q8N883 585 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 RFWD2Q8NHY2 731 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 PKNOX2Q96KN3 472 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 SDF2Q99470 211 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 ROPN1BQ9BZX4 212 aaPredicted RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 ROPN1Q9HAT0 212 aaPredicted RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 GPR52Q9Y2T5 361 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 DTNAQ9Y4J8 743 aa21.8■■□□□ 1.08
PTCH1-210ENST00000468211 GPC6Q9Y625 555 aaPredicted RBP21.8■■□□□ 1.08
PTCH1-210ENST00000468211 CENPVL1A0A0U1RR11 272 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 ESPNB1AK53 854 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 HEXAP06865 529 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 KRT16P08779 473 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 SOAT1P35610 550 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 PTH2RP49190 550 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 SUMO3P55854 103 aaPredicted RBP21.79■■□□□ 1.08
PTCH1-210ENST00000468211 PGS1Q32NB8 556 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 GTF2IRD2BQ6EKJ0 949 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 TFAP2EQ6VUC0 442 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 PLEKHM3Q6ZWE6 761 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 GTF2IRD2Q86UP8 949 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 STK32CQ86UX6 486 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 GABRG1Q8N1C3 465 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 NATD1Q8N6N6 113 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 CPNE4Q96A23 557 aaPredicted RBP21.79■■□□□ 1.08
PTCH1-210ENST00000468211 S100PBPQ96BU1 408 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 PRPF18Q99633 342 aaKnown RBP21.79■■□□□ 1.08
PTCH1-210ENST00000468211 TMEM204Q9BSN7 226 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 KLHL13Q9P2N7 655 aa21.79■■□□□ 1.08
PTCH1-210ENST00000468211 IGHV3-15A0A0B4J1V0 119 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 H3BNH8 94 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 SMAD7O15105 426 aaKnown RBP21.78■■□□□ 1.08
PTCH1-210ENST00000468211 ENPP1P22413 925 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 CLDN8P56748 225 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 C21orf58P58505 322 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 EMX2Q04743 252 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 TMEM201Q5SNT2 666 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 PDZK1Q5T2W1 519 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 OR4F3Q6IEY1 312 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 ALKBH2Q6NS38 261 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 FCRLAQ7L513 359 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 RAB3IL1Q8TBN0 382 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms