RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 VPS41P49754 854 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 ZNF41P51814 821 aaPredicted RBP10.03□□□□□ -0.8
VPS26A-204ENST00000467852 PRPS1P60891 318 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 TBCCQ15814 346 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 GALNT18Q6P9A2 607 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 SPATA21Q7Z572 469 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 C17orf78Q8N4C9 275 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 NKAPQ8N5F7 415 aaKnown RBP10.03□□□□□ -0.8
VPS26A-204ENST00000467852 OR7G3Q8NG95 312 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 OR4N2Q8NGD1 307 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 FAM167BQ9BTA0 163 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 TBL1XR1Q9BZK7 514 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 SLC17A5Q9NRA2 495 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
VPS26A-204ENST00000467852 C1RLQ9NZP8 487 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 UTS2RQ9UKP6 389 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 ICAM5Q9UMF0 924 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 PCDHGB5Q9Y5G0 923 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 NPEPPSL1A6NEC2 478 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NCF1BA6NI72 391 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NCF1CA8MVU1 366 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 PIP5K1BO14986 540 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ULK1O75385 1050 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 TTC4O95801 387 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ANGPTL1O95841 491 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 GPANK1O95872 356 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NCF1P14598 390 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 PCSK2P16519 638 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 CSNK2A2P19784 350 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NPR2P20594 1047 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 BSGP35613 385 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ATP4BP51164 291 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 CD69Q07108 199 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 OASLQ15646 514 aaKnown RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 PDK4Q16654 411 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 HSP90AA5PQ58FG0 334 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 REP15Q6BDI9 236 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 KLHL24Q6TFL4 600 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NPSR1Q6W5P4 371 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 OR4F15Q8NGB8 312 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 SLC9A6Q92581 669 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ALG3Q92685 438 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 APH1AQ96BI3 265 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ANKRD27Q96NW4 1050 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ZNF300Q96RE9 604 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NPAS1Q99742 590 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 KATNB1Q9BVA0 655 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NAT10Q9H0A0 1025 aaKnown RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-204ENST00000467852 HHATLQ9HCP6 504 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 OXSMQ9NWU1 459 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 FLRT3Q9NZU0 649 aa10.02□□□□□ -0.81
VPS26A-204ENST00000467852 ZCWPW2A0A1B0GU75 182 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 A0A1W2PRB8 838 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 LIASO43766 372 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ERAL1O75616 437 aaKnown RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 STK16O75716 305 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ZSCAN5DPP0CG00 497 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 FAM157BP0CG42 384 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 PTX3P26022 381 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 SHC1P29353 583 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 MAGEA1P43355 309 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 MRPS35P82673 323 aaKnown RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 SLC25A3Q00325 362 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 CDK16Q00536 496 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 TMEM176BQ3YBM2 270 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 LRRC70Q7Z2Q7 622 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 NUDT13Q86X67 352 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 TCAIMQ8N3R3 496 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 RNF175Q8N4F7 328 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 NOA1Q8NC60 698 aaKnown RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 C2CD4AQ8NCU7 369 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 RNF214Q8ND24 703 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ZNF416Q9BWM5 594 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ZNF717Q9BY31 904 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-204ENST00000467852 MED17Q9NVC6 651 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
VPS26A-204ENST00000467852 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 TMEM129A0AVI4 362 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 SDR42E2A6NKP2 422 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 KLF11O14901 512 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 CYTIPO60759 359 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 GBAP04062 536 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 ITGA5P08648 1049 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 ALOX5P09917 674 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 CCDC175P0C221 793 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 PGGT1BP53609 377 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 GPX6P59796 221 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 PHEXP78562 749 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 TGFBR3Q03167 851 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 DECR1Q16698 335 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 PLPPR5Q32ZL2 321 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 FIP1L1Q6UN15 594 aaKnown RBP10□□□□□ -0.81
VPS26A-204ENST00000467852 C4orf22Q6V702 233 aa10□□□□□ -0.81
VPS26A-204ENST00000467852 RBM43Q6ZSC3 357 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms