RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.77■□□□□ 0.68e-6■■■■■ 27.9
COL9A3-207ENST00000467819 ZCCHC23Q6ZST2 131 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 NUFIP2Q7Z417 695 aaKnown RBP18.77■□□□□ 0.6
COL9A3-207ENST00000467819 OR56A1Q8NGH5 318 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 OR2W6PQ8NHA6 318 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 OR5P2Q8WZ92 322 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 CPNE4Q96A23 557 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-207ENST00000467819 S100PBPQ96BU1 408 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 TACO1Q9BSH4 297 aaKnown RBP18.77■□□□□ 0.6
COL9A3-207ENST00000467819 ACTRT3Q9BYD9 372 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 OR10A4Q9H209 315 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 CXorf56Q9H5V9 222 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 EML4Q9HC35 981 aaKnown RBP18.77■□□□□ 0.6
COL9A3-207ENST00000467819 TIGARQ9NQ88 270 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 MKS1Q9NXB0 559 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 SLC17A7Q9P2U7 560 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 FAF1Q9UNN5 650 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-207ENST00000467819 KCNE3Q9Y6H6 103 aa18.77■□□□□ 0.6
COL9A3-207ENST00000467819 CADP27708 2225 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 H3BNH8 94 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 GTPBP1O00178 669 aaKnown RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 ZNF195O14628 629 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 C6orf47O95873 294 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 RNPS1Q15287 305 aaKnown RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 TOMM34Q15785 309 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 TMEM176BQ3YBM2 270 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 KLHL26Q53HC5 615 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 XKR7Q5GH72 579 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 TFAP2EQ6VUC0 442 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 TUSC5Q8IXB3 177 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 ZNF611Q8N823 705 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 BANPQ8N9N5 519 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 STEAP2Q8NFT2 490 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 RFWD2Q8NHY2 731 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 RAB3IL1Q8TBN0 382 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 AKAP1Q92667 903 aaKnown RBP eCLIP18.76■□□□□ 0.592e-7■□□□□ 10.8
COL9A3-207ENST00000467819 C3orf30Q96M34 536 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 TMEM204Q9BSN7 226 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 HOXD1Q9GZZ0 328 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 GPATCH2Q9NW75 528 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 KLHL13Q9P2N7 655 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 ICAM5Q9UMF0 924 aa18.76■□□□□ 0.59
COL9A3-207ENST00000467819 GPC6Q9Y625 555 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-207ENST00000467819 GJE1A6NN92 205 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 SPAG7O75391 227 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 SKAP2O75563 359 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-207ENST00000467819 GCM2O75603 506 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-207ENST00000467819 KRT16P08779 473 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 NID1P14543 1247 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ATP12AP54707 1039 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 SUMO3P55854 103 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ATP5J2P56134 94 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 FCRLAQ7L513 359 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 HOMEZQ8IX15 550 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ZNF619Q8N2I2 560 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 KRTCAP2Q8N6L1 136 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 TMCO5AQ8N6Q1 288 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 OR5AK3PQ8NH89 298 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 COQ10BQ9H8M1 238 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ANKZF1Q9H8Y5 726 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ZNF701Q9NV72 531 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-207ENST00000467819 ATAD3AQ9NVI7 634 aa18.75■□□□□ 0.59
COL9A3-207ENST00000467819 IGHV3-15A0A0B4J1V0 119 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 CFLARO15519 480 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 PAX1P15863 534 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 PRKCAP17252 672 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 IL32P24001 234 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 ADH6P28332 368 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 SOAT1P35610 550 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 LSM12Q3MHD2 195 aaKnown RBP18.74■□□□□ 0.59
COL9A3-207ENST00000467819 C6orf136Q5SQH8 315 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 IL23RQ5VWK5 629 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 PRIMA1Q86XR5 153 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 GABRG1Q8N1C3 465 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 FNDC5Q8NAU1 212 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 PSMA8Q8TAA3 256 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 GPR119Q8TDV5 335 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 ZFP90Q8TF47 636 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 LAMP3Q9UQV4 416 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 ACTL7BQ9Y614 415 aa18.74■□□□□ 0.59
COL9A3-207ENST00000467819 INAFM1C9JVW0 142 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 CLOCKO15516 846 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 LYPLA1O75608 230 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-207ENST00000467819 PRKD3O94806 890 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 ARRB2P32121 409 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 CCR4P51679 360 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 PPP2R2BQ00005 443 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 CAPRIN1Q14444 709 aaKnown RBP18.73■□□□□ 0.59
COL9A3-207ENST00000467819 SFRP5Q5T4F7 317 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 OR5D16Q8NGK9 328 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 SFXN5Q8TD22 340 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 ZNF524Q96C55 264 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 OR7D2Q96RA2 312 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 PRPF18Q99633 342 aaKnown RBP18.73■□□□□ 0.59
COL9A3-207ENST00000467819 HDHD5Q9BXW7 423 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 DTNAQ9Y4J8 743 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 RNF115Q9Y4L5 304 aa18.73■□□□□ 0.59
COL9A3-207ENST00000467819 SONP18583 2426 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms