RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ICOSLGO75144 302 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PDE9AO76083 593 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR6B1O95007 311 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 MFN2O95140 757 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SFTPCP11686 197 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 CYP4B1P13584 511 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 DCTP40126 519 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 RNF144AP50876 292 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SOX8P57073 446 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PSPHP78330 225 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 KCNC4Q03721 635 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 NPTX1Q15818 432 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 MAPK14Q16539 360 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 DUSP7Q16829 419 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PDZK1Q5T2W1 519 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 IRAK1BP1Q5VVH5 260 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 BROXQ5VW32 411 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 IL20RBQ6UXL0 311 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 GPR141Q7Z602 305 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ELMOD2Q8IZ81 293 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM156Q8N614 296 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF614Q8N883 585 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SLC26A7Q8TE54 656 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ASB15Q8WXK1 588 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SPACA9Q96E40 222 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 LRGUKQ96M69 825 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 MTHFD2LQ9H903 347 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 POLE3Q9NRF9 147 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 DCAF13Q9NV06 445 aaKnown RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 GPR83Q9NYM4 423 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SEC14L3Q9UDX4 400 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 TEKT2Q9UIF3 430 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PCDHGA10Q9Y5H3 936 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FREM3P0C091 2139 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PKD1L2Q7Z442 2459 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 PCP4L1A6NKN8 68 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 UTS2O95399 124 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF682O95780 498 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 F10P00742 488 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FBXO45P0C2W1 286 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 IL7RP16871 459 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 RPL5P46777 297 aaKnown RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 GNG2P59768 71 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ACTR3P61158 418 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 NTRK2Q16620 822 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 AGAP7PQ5VUJ5 663 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 LINC00696Q6ZRV3 163 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 KCTD20Q7Z5Y7 419 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 VRK2Q86Y07 508 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ARMC8Q8IUR7 673 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 BEST3Q8N1M1 668 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 SLC15A4Q8N697 577 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FAM86B1Q8N7N1 296 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 FDCSPQ8NFU4 85 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR10G3Q8NGC4 313 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 OR52P1PQ8NH57 321 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF354BQ96LW1 612 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 AGAP4Q96P64 663 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF552Q9H707 407 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 MRPL39Q9NYK5 338 aaKnown RBP6.3□□□□□ -1.4
SCAF4-204ENST00000467731 STMN3Q9NZ72 180 aa6.3□□□□□ -1.4
SCAF4-204ENST00000467731 A0A087WV48 116 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 AGAP5A6NIR3 686 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM229AB2RXF0 380 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 NPIPB9F8W1W9 429 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 GUSBP08236 651 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 RPS4Y1P22090 263 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ATP12AP54707 1039 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CCNIQ14094 377 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF791Q3KP31 576 aaPredicted RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 GRAMD1BQ3KR37 738 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CYBRD1Q53TN4 286 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF311Q5JNZ3 666 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ABHD17BQ5VST6 288 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 OPN5Q6U736 354 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ENPP6Q6UWR7 440 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 APOOLQ6UXV4 268 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 VTCN1Q7Z7D3 282 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 OR52E4Q8NGH9 312 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 SPPL2AQ8TCT8 520 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TPD52L3Q96J77 140 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 SPATA5L1Q9BVQ7 753 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 UBQLN4Q9NRR5 601 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 RLIMQ9NVW2 624 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 HPF1Q9NWY4 346 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 SUV39H1O43463 412 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 HS6ST1O60243 411 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TPST1O60507 370 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ENTPD5O75356 428 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 NID1P14543 1247 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms