RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ADRA2CP18825 462 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 EIF1P41567 113 aaKnown RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 SLC1A3P43003 542 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 KHKP50053 298 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 SLC25A3Q00325 362 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 IL1RL1Q01638 556 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 GTF2H2Q13888 395 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 ADIPOQQ15848 244 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 C9orf135Q5VTT2 229 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 STEAP4Q687X5 459 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 GTF2H2CQ6P1K8 395 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 CCDC137Q6PK04 289 aaKnown RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 KLHL24Q6TFL4 600 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 RBMS3Q6XE24 437 aaKnown RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 IKBIPQ70UQ0 350 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 GOLGA7Q7Z5G4 137 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 SAMD14Q8IZD0 417 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 WDR31Q8NA23 367 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 C22orf15Q8WYQ4 148 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 APH1AQ96BI3 265 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 DUX5Q96PT3 197 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 CDK15Q96Q40 435 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 CCT8L2Q96SF2 557 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 ATOH8Q96SQ7 321 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 KLHDC3Q9BQ90 382 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 MMP27Q9H306 513 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 PLK3Q9H4B4 646 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 IPPKQ9H8X2 491 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 C3orf14Q9HBI5 128 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 DYNLRB1Q9NP97 96 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 NSMCE4AQ9NXX6 385 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 EMC3Q9P0I2 261 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 FBXO9Q9UK97 447 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 RYR3Q15413 4870 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ALG1L2C9J202 215 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 hCG_2039718K7EN88 272 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 KIF2AO00139 706 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ZNF195O14628 629 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 NUDT14O95848 222 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 AVPP01185 164 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 IGKV1D-16P01601 117 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ITGA5P08648 1049 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 LINGO3P0C6S8 592 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 GAAP10253 952 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 GFAPP14136 432 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 GCH1P30793 250 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 CXCR5P32302 372 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 GPR6P46095 362 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 PRIM2P49643 509 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 FOXG1P55316 489 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 RAC3P60763 192 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 IFT88Q13099 833 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 EFNB3Q15768 340 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 SGO1Q5FBB7 561 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 FRG2Q64ET8 278 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ANKMY2Q8IV38 441 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ZCCHC24Q8N2G6 241 aaKnown RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 L3MBTL4Q8NA19 623 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 B4GALNT2Q8NHY0 566 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 FBXO27Q8NI29 283 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 NANPQ8TBE9 248 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ZNF75CPQ92670 426 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ATP6V1E2Q96A05 226 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 MUS81Q96NY9 551 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 FRG2BQ96QU4 278 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 SLC17A5Q9NRA2 495 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 TREM2Q9NZC2 230 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 ACOT9Q9Y305 439 aa8.89□□□□□ -0.99
HDAC3-203ENST00000467533 NOSIPQ9Y314 301 aaKnown RBP8.89□□□□□ -0.99
HDAC3-203ENST00000467533 GXYLT2A0PJZ3 443 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 DNAJC9-AS1A6NH13 148 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 DNALI1O14645 258 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PIN1P1O15428 100 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 EFNA2O43921 213 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PRSS23O95084 383 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 WNT11O96014 354 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 IL3P08700 152 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 HPGDP15428 266 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PRTN3P24158 256 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 FPR2P25090 351 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 GP5P40197 560 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 TRA2BP62995 288 aaKnown RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 GALNT1Q10472 559 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 ILF2Q12905 390 aaKnown RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 SELENBP1Q13228 472 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 FRG1Q14331 258 aaKnown RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 SLC29A2Q14542 456 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PPP1R7Q15435 360 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 ADRM1Q16186 407 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PFKFB4Q16877 469 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 GLE1Q53GS7 698 aaKnown RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 ISCA2Q86U28 154 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 MISPQ8IVT2 679 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 PDIK1LQ8N165 341 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 C17orf78Q8N4C9 275 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 C1orf52Q8N6N3 182 aaKnown RBP8.88□□□□□ -0.99
HDAC3-203ENST00000467533 GRK7Q8WTQ7 553 aa8.88□□□□□ -0.99
HDAC3-203ENST00000467533 UBE2FQ969M7 185 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms