RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 PRAMEF5Q5TYX0 476 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 PRAMEF6Q5VXH4 476 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 MEDAGQ5VYS4 303 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 TMUB2Q71RG4 321 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 BBS5Q8N3I7 341 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 MFSD9Q8NBP5 474 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 OR9K2Q8NGE7 335 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 OR9A4Q8NGU2 314 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 MIPOL1Q8TD10 442 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 SLC2A14Q8TDB8 520 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 SCFD1Q8WVM8 642 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 TMEM80Q96HE8 168 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 RBM14Q96PK6 669 aaKnown RBP3.31□□□□□ -1.88
SMC4-208ENST00000467468 ATOH8Q96SQ7 321 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 NIPSNAP3BQ9BS92 247 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 ROPN1BQ9BZX4 212 aaPredicted RBP3.31□□□□□ -1.88
SMC4-208ENST00000467468 NXF5Q9H1B4 397 aaKnown RBP3.31□□□□□ -1.88
SMC4-208ENST00000467468 IKZF5Q9H5V7 419 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 IL36GQ9NZH8 169 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 WRAP73Q9P2S5 460 aaPredicted RBP3.31□□□□□ -1.88
SMC4-208ENST00000467468 SUN2Q9UH99 717 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 TMED5Q9Y3A6 229 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 USP16Q9Y5T5 823 aa3.31□□□□□ -1.88
SMC4-208ENST00000467468 TP53BP1Q12888 1972 aaPredicted RBP3.31□□□□□ -1.88
SMC4-208ENST00000467468 USP6P35125 1406 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 F5H6K3 240 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 FOXE1O00358 373 aaPredicted RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 NDUFB10O96000 172 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 PGK1P00558 417 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 IGHG4P01861 327 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 H2AFZP0C0S5 128 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 NCK1P16333 377 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CYP2B6P20813 491 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CD80P33681 288 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 ETV5P41161 510 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 PRMT2P55345 433 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 KLRC3Q07444 240 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 ELAVL2Q12926 359 aaKnown RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 LPAL2Q16609 132 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 MICAQ29983 383 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CNPY1Q3B7I2 92 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 SLC25A52Q3SY17 297 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 TEX44Q53QW1 395 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 ZNF506Q5JVG8 444 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 PDZK1Q5T2W1 519 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 VITQ6UXI7 678 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 SERINC5Q86VE9 423 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CLEC4FQ8N1N0 589 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 RAB3IL1Q8TBN0 382 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 TCEANC2Q96MN5 208 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 MTMR9Q96QG7 549 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CITED1Q99966 193 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 VGLL1Q99990 258 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CHRDL1Q9BU40 450 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 HCAR1Q9BXC0 346 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 PPDPFQ9H3Y8 114 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 GLIPR2Q9H4G4 154 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 NCOR1P1Q9H4R4 102 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 SPATA7Q9P0W8 599 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 ZNF639Q9UID6 485 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 MUTYHQ9UIF7 546 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 SCML2Q9UQR0 700 aa3.3□□□□□ -1.88
SMC4-208ENST00000467468 CAB39Q9Y376 341 aaPredicted RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 AK6Q9Y3D8 172 aaKnown RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 TDRD15B5MCY1 1934 aaKnown RBP3.3□□□□□ -1.88
SMC4-208ENST00000467468 IGHV2-70DA0A0C4DH43 119 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 A0A1B0GTH9 108 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 SAGE2PA6NJ88 616 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 PP2D1A8MPX8 630 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 PRKAB2O43741 272 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 HPP00738 406 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 CD55P08174 381 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 MELTFP08582 738 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 CT45A10P0DMU9 189 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 UMPSP11172 480 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 UGT1A5P35504 534 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ACVR1BP36896 505 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 EPS15P42566 896 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ATP5OP48047 213 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ALDH3B2P48448 385 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 FNTAP49354 379 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ARHGDIBP52566 201 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 OC90Q02509 493 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 PUDPQ08623 228 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 CYLC2Q14093 348 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 SLC15A2Q16348 729 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 DPYSL2Q16555 572 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 TP53I3Q53FA7 332 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 HSP90AB3PQ58FF7 597 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ARMC12Q5T9G4 340 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ATL3Q6DD88 541 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 SERPINA9Q86WD7 417 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms