RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZYG11AQ6WRX3 759 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 C12orf54Q6X4T0 127 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF704Q6ZNC4 412 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 RFLNBQ8N5W9 214 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 DPP10Q8N608 796 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 GBP7Q8N8V2 638 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 C9orf106Q8NAJ2 232 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 PPFIBP2Q8ND30 876 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 CPEB3Q8NE35 698 aaKnown RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TRPV3Q8NET8 790 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 OR4K1Q8NGD4 311 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ACTL9Q8TC94 416 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ATG4AQ8WYN0 398 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 FAM136AQ96C01 138 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 REPS1Q96D71 796 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 SPACA9Q96E40 222 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 FAM120BQ96EK7 910 aaKnown RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 BIRC8Q96P09 236 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 HIST1H2AAQ96QV6 131 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TNFRSF13CQ96RJ3 184 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 MACROD1Q9BQ69 325 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 RHNO1Q9BSD3 238 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TMEM204Q9BSN7 226 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 HAUS8Q9BT25 410 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 DOHHQ9BU89 302 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ITPAQ9BY32 194 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 FUT8Q9BYC5 575 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 SLCO5A1Q9H2Y9 848 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 UBQLN3Q9H347 655 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 PNO1Q9NRX1 252 aaKnown RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 KLHL28Q9NXS3 571 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 COPS7AQ9UBW8 275 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 HEATR5AQ86XA9 2040 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CTAGE15A4D2H0 777 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CCDC151A5D8V7 595 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 E5RI56 91 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 C16orf97H3BN30 126 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 J3KTA2 159 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 TNFSF13O75888 250 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ACTL6BO94805 426 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 PNPP00491 289 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 PLGP00747 810 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 IFNB1P01574 187 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CSF1P09603 554 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CTAGE8P0CG41 777 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 MPC1LP0DKB6 136 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SMIM10L1P0DMW3 83 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CPOXP36551 454 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ACVR1BP36896 505 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ACAA2P42765 397 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 COMPP49747 757 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 DIO1P49895 249 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ALDH18A1P54886 795 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 HADHBP55084 474 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 EIF3EP60228 445 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 TBPL1P62380 186 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 OLR1P78380 273 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 FAM27E3Q08E93 113 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 EPS8Q12929 822 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 FOXF2Q12947 444 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 BNIP1Q12981 228 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 BIKQ13323 160 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CAMK2DQ13557 499 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SNX1Q13596 522 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SERTAD2Q14140 314 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 EFTUD2Q15029 972 aaKnown RBP eCLIP4.87□□□□□ -1.631e-9■■□□□ 11.5
PTCD3-207ENST00000467273 NTRK2Q16620 822 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 NRF1Q16656 503 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 HSP90AA5PQ58FG0 334 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CYB5R2Q6BCY4 276 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 LRRC8EQ6NSJ5 796 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CASC4Q6P4E1 433 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 LCTLQ6UWM7 567 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ENPP6Q6UWR7 440 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 RBM43Q6ZSC3 357 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 R3HCC1LQ7Z5L2 792 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CTAGE6Q86UF2 777 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CCDC50Q8IVM0 306 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CTAGE4Q8IX94 777 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 TC2NQ8N9U0 490 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 FAM76AQ8TAV0 307 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 PTPMT1Q8WUK0 201 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SLC5A11Q8WWX8 675 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ABTB1Q969K4 478 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 DTNBP1Q96EV8 351 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SMIM10Q96HG1 83 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 FAM111AQ96PZ2 611 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 NAP1L3Q99457 506 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 GAL3ST1Q99999 423 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 UGT2B28Q9BY64 529 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ACTRT3Q9BYD9 372 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 PROK2Q9HC23 129 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 PRTFDC1Q9NRG1 225 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 NINJ2Q9NZG7 142 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CLCF1Q9UBD9 225 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 SLC2A6Q9UGQ3 507 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms