RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PRKRAO75569 313 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 FGF19O95750 216 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 RLN2P04090 185 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 BCHEP06276 602 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 S100A11P31949 105 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 EEF1A2Q05639 463 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 PDE7AQ13946 482 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 GAB4Q2WGN9 574 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC36A2Q495M3 483 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 PYHIN1Q6K0P9 492 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 TRIM40Q6P9F5 258 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 C5orf46Q6UWT4 87 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 DEF8Q6ZN54 512 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC9B2Q86UD5 537 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 AMZ2Q86W34 360 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 SLITRK4Q8IW52 837 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF687Q8N1G0 1237 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 HORMAD2Q8N7B1 307 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CNOT9Q92600 299 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 C7orf50Q9BRJ6 194 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CHIAQ9BZP6 476 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 EPHX3Q9H6B9 360 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF275Q9NSD4 429 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 DOCK9Q9BZ29 2069 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 TP53BP1Q12888 1972 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CARNS1A5YM72 827 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 GLOD5A6NK44 160 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 H3BN98 237 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 RECKO95980 971 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 MANFP55145 182 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 GK2Q14410 553 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 ELAVL3Q14576 367 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CCDC157Q569K6 752 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 SFRP5Q5T4F7 317 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 BCDIN3DQ7Z5W3 292 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 ADCK2Q7Z695 626 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CMIPQ8IY22 773 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 C12orf45Q8N5I9 185 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 SEMA4CQ9C0C4 833 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 MYNNQ9NPC7 610 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 CCDC88CQ9P219 2028 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 LINC01553A4QN01 128 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF593O00488 134 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 EIF1BO60739 113 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 B4GALT2O60909 372 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ALPPL2P10696 532 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 PPP3CBP16298 524 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 RFC3P40938 356 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 EIF1P41567 113 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 XKP51811 444 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 MICBQ29980 383 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 IDNKQ5T6J7 187 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 SEZ6L2Q6UXD5 910 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ERN2Q76MJ5 926 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 OAFQ86UD1 273 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 FAM129CQ86XR2 697 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 FAM26EQ8N5C1 309 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 RAD51AP1Q96B01 352 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 WDR34Q96EX3 536 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 CBLCQ9ULV8 474 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ENPP4Q9Y6X5 453 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 FFAR1O14842 300 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 PRAF2O60831 178 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 SEMA7AO75326 666 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 PCDH8O95206 1070 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ATP5A1P25705 553 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ARHGDIBP52566 201 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 LIM2P55344 173 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF770Q6IQ21 691 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 HAGHLQ6PII5 290 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 TMEM17Q86X19 198 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 OXR1Q8N573 874 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 FBXO15Q8NCQ5 510 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 TMIEQ8NEW7 156 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC38A5Q8WUX1 472 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 MBNL1Q9NR56 388 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 TEX10Q9NXF1 929 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 RPS6KB2Q9UBS0 482 aa16.82■□□□□ 0.28
SNAPC3-205ENST00000467062 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 EDDM13A0A1B0GTR0 161 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 LCMT2O60294 686 aaKnown RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 NME6O75414 186 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 EIF3GO75821 320 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SOX14O95416 240 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 HPXP02790 462 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 PVALBP20472 110 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 CCR6P51684 374 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 C17orf64Q86WR6 236 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 OR5M9Q8NGP3 310 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SEMA3GQ9NS98 782 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SEC14L3Q9UDX4 400 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC27A6Q9Y2P4 619 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 LRRK1Q38SD2 2015 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 TRBV4-1A0A0J9YWV2 114 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 PRR23D1E9PI22 279 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 GABRPO00591 440 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms