RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 MED17Q9NVC6 651 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 FBXO34Q9NWN3 711 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 C1orf109Q9NX04 203 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PAQR5Q9NXK6 330 aaPredicted RBP8.65□□□□□ -1.02
USP39-212ENST00000465514 RNF115Q9Y4L5 304 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 PTGDR2Q9Y5Y4 395 aa8.65□□□□□ -1.02
USP39-212ENST00000465514 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 C7orf72A4D263 438 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 NPIPB8E9PQR5 432 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 SLC28A1O00337 649 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 RGS14O43566 566 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 GLRA3O75311 464 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 CD8AP01732 235 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 CREB1P16220 341 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 SLC25A16P16260 332 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 PRPH2P23942 346 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 COMPP49747 757 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 MANFP55145 182 aaKnown RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 CARD18P57730 90 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ACTG1P63261 375 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 NRF1Q16656 503 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 DUSP5Q16690 384 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ZNF672Q499Z4 452 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 MIDNQ504T8 468 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 PDSS1Q5T2R2 415 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 HBMQ6B0K9 141 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ESPNLQ6ZVH7 1005 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 SZRD1Q7Z422 152 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 STK32CQ86UX6 486 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 IFT20Q8IY31 132 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ZNF525Q8N782 197 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 CEP112Q8N8E3 955 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 OR6Y1Q8NGX8 325 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ZFP28Q8NHY6 868 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 POC1BQ8TC44 478 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ACTRT2Q8TDY3 377 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 OSTF1Q92882 214 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 PPCDCQ96CD2 204 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 GIMAP5Q96F15 307 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 OTUB1Q96FW1 271 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 C16orf58Q96GQ5 468 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 ZNF764Q96H86 408 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 TRAF4Q9BUZ4 470 aaPredicted RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 TXLNGYQ9BZA5 131 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 IQCGQ9H095 443 aaKnown RBP8.64□□□□□ -1.03
USP39-212ENST00000465514 ALG2Q9H553 416 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 REEP4Q9H6H4 257 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 UBQLN4Q9NRR5 601 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 OXSMQ9NWU1 459 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 SH3BP4Q9P0V3 963 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 NTMQ9P121 344 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 BAIAP2L1Q9UHR4 511 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 GPR52Q9Y2T5 361 aa8.64□□□□□ -1.03
USP39-212ENST00000465514 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
USP39-212ENST00000465514 WNK1Q9H4A3 2382 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 SCDO00767 359 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 PLIN3O60664 434 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 TBX19O60806 448 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 TUBBP07437 444 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 ALOX5P09917 674 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CPA3P15088 417 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 HPGDP15428 266 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 SDC1P18827 310 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 PSMB1P20618 241 aaKnown RBP8.63□□□□□ -1.03
USP39-212ENST00000465514 EFNA1P20827 205 aaPredicted RBP8.63□□□□□ -1.03
USP39-212ENST00000465514 ME2P23368 584 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 SHC1P29353 583 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 AGTR1P30556 359 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 LCN1P31025 176 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 SFTPDP35247 375 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 FRKP42685 505 aaPredicted RBP8.63□□□□□ -1.03
USP39-212ENST00000465514 SERPINB4P48594 390 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CCT5P48643 541 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 GZMKP49863 264 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 DSCR9P59020 149 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 ZNF844Q08AG5 666 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CD226Q15762 336 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 PDCD2Q16342 344 aaPredicted RBP8.63□□□□□ -1.03
USP39-212ENST00000465514 CCDC153Q494R4 210 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CCNJQ5T5M9 372 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 Q6ZSR9 355 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 TRABD2AQ86V40 505 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 MISPQ8IVT2 679 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 LILRA2Q8N149 483 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 COX18Q8N8Q8 333 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 KBTBD8Q8NFY9 601 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 OR2T11Q8NH01 316 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CLHC1Q8NHS4 586 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 B4GALNT2Q8NHY0 566 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 HTRA1Q92743 480 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 S100PBPQ96BU1 408 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 FCRL1Q96LA6 429 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 MS4A4EQ96PG1 132 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 TSSK3Q96PN8 268 aa8.63□□□□□ -1.03
USP39-212ENST00000465514 CCT7Q99832 543 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms