RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ACAD8Q9UKU7 415 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
HDAC6-215ENST00000465457 NUP214P35658 2090 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-215ENST00000465457 HCFC1P51610 2035 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 DPPA5A6NC42 116 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 DYRK3O43781 588 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PRAMEF2O60811 474 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 DNAJB6O75190 326 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 STX11O75558 287 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 UGT2B17O75795 530 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 LGI1O95970 557 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 H1F0P07305 194 aaKnown RBP12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PRKACGP22612 351 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 MMP11P24347 488 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 DAPP51397 102 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 NUP107P57740 925 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PMP22Q01453 160 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 DSG2Q14126 1118 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 LARS2Q15031 903 aaKnown RBP12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ZIK1Q3SY52 487 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ZNF691Q5VV52 312 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PARP8Q8N3A8 854 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 OIT3Q8WWZ8 545 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 SLC9A6Q92581 669 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 NRGNQ92686 78 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 HDAC2Q92769 488 aaKnown RBP12.71□□□□□ -0.37
HDAC6-215ENST00000465457 C14orf79Q96F83 325 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PEX11GQ96HA9 241 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 MUS81Q96NY9 551 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PITX2Q99697 317 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 LHPPQ9H008 270 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ANKRD19PQ9H560 264 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 CXorf21Q9HAI6 301 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ADAP2Q9NPF8 381 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 PAPOLBQ9NRJ5 636 aaKnown RBP12.71□□□□□ -0.37
HDAC6-215ENST00000465457 ACER3Q9NUN7 267 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 WDR45Q9Y484 360 aa12.71□□□□□ -0.37
HDAC6-215ENST00000465457 A0A1W2PRQ8 180 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 PRAMEF25A6NGN4 478 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 FAM227AF5H4B4 570 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 DSCR3O14972 297 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ADAP00813 363 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 HBQ1P09105 142 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ACP2P11117 423 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 TNFRSF1BP20333 461 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 GCGRP47871 477 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ID2Q02363 134 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 MGAT2Q10469 447 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF155Q12901 538 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 MFAP5Q13361 173 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 DGCR6Q14129 220 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 C3AR1Q16581 482 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 DUSP5Q16690 384 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 LIN52Q52LA3 116 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ISLR2Q6UXK2 745 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 COX15Q7KZN9 410 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 TSPYL5Q86VY4 417 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 OFCC1Q8IZS5 231 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 COX18Q8N8Q8 333 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 SLC16A11Q8NCK7 471 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 TOR1AIP2Q8NFQ8 470 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 OR51Q1Q8NH59 317 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 CDS1Q92903 461 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 RIT1Q92963 219 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 SLC35A4Q96G79 324 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ALPK1Q96QP1 1244 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 SPSB2Q99619 263 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ARHGDIGQ99819 225 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 LMF2Q9BU23 707 aaKnown RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 RIBC2Q9H4K1 309 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 GSX1Q9H4S2 264 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-215ENST00000465457 MGAT4BQ9UQ53 548 aa12.7□□□□□ -0.38
HDAC6-215ENST00000465457 A0A1B0GX78 115 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 KIAA0513O60268 411 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 NKX2-2O95096 273 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 PTGER1P34995 402 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 MAP3K8P41279 467 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 HLCSP50747 726 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 CSNK2BP67870 215 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 POU6F2P78424 691 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-215ENST00000465457 TEKQ02763 1124 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 CHRNEQ04844 493 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 PPP1R8Q12972 351 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms