RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 OMPP47874 163 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 GIPRP48546 466 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 EFNB1P98172 346 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 RHAGQ02094 409 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TSPAN31Q12999 210 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ISXQ2M1V0 245 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SLC25A30Q5SVS4 291 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CCNJQ5T5M9 372 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 DHRS13Q6UX07 377 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF730Q6ZMV8 503 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 DCDC5Q6ZRR9 648 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ATCAYQ86WG3 371 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 OR8D4Q8NGM9 314 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 STT3BQ8TCJ2 826 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CHPT1Q8WUD6 406 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 OPALINQ96PE5 141 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SDF2Q99470 211 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 MCHR1Q99705 422 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PELOQ9BRX2 385 aaKnown RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CENPOQ9BU64 300 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TAPBPLQ9BX59 468 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 VN1R1Q9GZP7 353 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CLEC2DQ9UHP7 191 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 LOXL2Q9Y4K0 774 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 B4E171 279 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 HRKO00198 91 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 AP3D1O14617 1153 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZGLP1P0C6A0 271 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 S1PR1P21453 382 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 IFNGR2P38484 337 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TSPAN7P41732 249 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PGDP52209 483 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SMSP52788 366 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 FOXL2P58012 376 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 EEF1A1P68104 462 aaKnown RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ITGADQ13349 1161 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF267Q14586 743 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 NCF4Q15080 339 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 NSDHLQ15738 373 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SSX1Q16384 188 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SYT14P1Q58G82 188 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 GDF7Q7Z4P5 450 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 MRGPREQ86SM8 312 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 NKAIN4Q8IVV8 208 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CENPSQ8N2Z9 138 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 KBTBD8Q8NFY9 601 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 OR52R1Q8NGF1 315 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 MCFD2Q8NI22 146 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PIGXQ8TBF5 258 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TEX47Q8TBZ9 253 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF582Q96NG8 517 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 DACH2Q96NX9 599 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CHCHD6Q9BRQ6 235 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CNPPD1Q9BV87 410 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF350Q9GZX5 532 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PIGUQ9H490 435 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CNIH4Q9P003 139 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 FER1L5A0AVI2 2057 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 COL27A1Q8IZC6 1860 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 OR5F1O95221 314 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 ONECUT2O95948 504 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 MT-CO3P00414 261 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 SSTR4P31391 388 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 GALNSP34059 522 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 DUSP8Q13202 625 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 ATP1A4Q13733 1029 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 LARS2Q15031 903 aaKnown RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 INAQ16352 499 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 DECR1Q16698 335 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 DCST2Q5T1A1 773 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 LCN10Q6JVE6 187 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 RASSF6Q6ZTQ3 369 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 RAB11FIP2Q7L804 512 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 OVCH1Q7RTY7 1134 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 GLRX5Q86SX6 157 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF619Q8N2I2 560 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 DEFB124Q8NES8 71 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 ACOT11Q8WXI4 607 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 SLC41A3Q96GZ6 507 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 ULBP3Q9BZM4 244 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 AKIRIN1Q9H9L7 192 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 PNO1Q9NRX1 252 aaKnown RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 TBCCD1Q9NVR7 557 aa13.4□□□□□ -0.26
COL5A1-205ENST00000464187 CCDC59Q9P031 241 aaKnown RBP13.4□□□□□ -0.26
COL5A1-205ENST00000464187 TCRBV16S1A1N1A0A5B0 115 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 C17orf105B2RV13 164 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 CCRL2O00421 344 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PIP5K1CO60331 668 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 COQ9O75208 318 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms