RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MMACHCQ9Y4U1 282 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 TRAV27A0A087WT01 109 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 UNC119BA6NIH7 251 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 OIP5O43482 229 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 GUSBP08236 651 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 HBQ1P09105 142 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
VAPB-203ENST00000463370 GALNSP34059 522 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SOX3P41225 446 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 BMXP51813 675 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 PRKCDQ05655 676 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 DCTN2Q13561 401 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 NCF4Q15080 339 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 NSDHLQ15738 373 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 APOOLQ6UXV4 268 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 LANCL3Q6ZV70 420 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SLCO6A1Q86UG4 719 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 BPIFA2Q96DR5 249 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CRELD1Q96HD1 420 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 BCL7BQ9BQE9 202 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 NUDT9Q9BW91 350 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 GAREM1Q9H706 876 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 CLCA3PQ9Y6N3 262 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 LOC100506127A0A0U1RQW1 187 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 TCRBV16S1A1N1A0A5B0 115 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SERINC4A6NH21 518 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 FAM183AA6NL82 134 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 C17orf51A8MQB3 221 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 PRODHO43272 600 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 LAMTOR5O43504 91 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CHP2O43745 196 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SOX30O94993 753 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CSTAP01040 98 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 RPLP0P05388 317 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 MSL3P1P0C860 447 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ETV5P41161 510 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ETV1P50549 477 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 LIMK1P53667 647 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 RPS3AP61247 264 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 NR0B2Q15466 257 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.79□□□□□ -0.52
VAPB-203ENST00000463370 ALG10BQ5I7T1 473 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 KMT5CQ86Y97 462 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 RNF113BQ8IZP6 322 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 EID2Q8N6I1 236 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 OR2T33Q8NG76 320 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 OR7G1Q8NGA0 311 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 C9orf43Q8TAL5 461 aaPredicted RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 EDAQ92838 391 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SLC38A2Q96QD8 506 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 PELOQ9BRX2 385 aaKnown RBP11.79□□□□□ -0.52
VAPB-203ENST00000463370 CENPOQ9BU64 300 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 DUSP23Q9BVJ7 150 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SYNDIG1Q9H7V2 258 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 PRODH2Q9UF12 536 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 MKL2Q9ULH7 1088 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 CORINQ9Y5Q5 1042 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 SEC16AO15027 2179 aa11.79□□□□□ -0.52
VAPB-203ENST00000463370 KDM4EB2RXH2 506 aaPredicted RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 M0R3G1 203 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 OPRL1P41146 370 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 KLHL26Q53HC5 615 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 B3GLCTQ6Y288 498 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 C9orf40Q8IXQ3 194 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 LSMEM1Q8N8F7 131 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 OR51A7Q8NH64 312 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 ADIPOR1Q96A54 375 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 HS6ST2Q96MM7 605 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 TAPBPLQ9BX59 468 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 MED31Q9Y3C7 131 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 IGHV3-20A0A0C4DH32 117 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 IGHV5-10-1A0A0J9YXX1 117 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 LRRN3E7EW58 273 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 J3QRK9 145 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 WWP2O00308 870 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 BHLHE40O14503 412 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 GDF9O60383 454 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 NADKO95544 446 aaPredicted RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 SAGP10523 405 aaPredicted RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 CD79BP40259 229 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms