RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 IFNEQ86WN2 208 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 ZFAND4Q86XD8 727 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 DCUN1D3Q8IWE4 304 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 GPR137CQ8N3F9 429 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 DHRSXQ8N5I4 330 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 ZNF491Q8N8L2 437 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 SUMF1Q8NBK3 374 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 SLC22A8Q8TCC7 542 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 MAIP1Q8WWC4 291 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 ST8SIA1Q92185 356 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 STARD8Q92502 1023 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 PEX13Q92968 403 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 FAHD2AQ96GK7 314 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 CITED1Q99966 193 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 SYT15Q9BQS2 421 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 PARLQ9H300 379 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 MEPEQ9NQ76 525 aaPredicted RBP4.75□□□□□ -1.65
COPS3-205ENST00000463097 ZNF446Q9NWS9 450 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 NDE1Q9NXR1 346 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 TMEM181Q9P2C4 612 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 THEGQ9P2T0 379 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 KIF21AQ7Z4S6 1674 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 UNC13AQ9UPW8 1703 aa4.75□□□□□ -1.65
COPS3-205ENST00000463097 ABCA10Q8WWZ4 1543 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 ZNF608Q9ULD9 1512 aaPredicted RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 PPIAL4EA0A075B759 164 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 KRT14P02533 472 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 PPIAL4FP0DN26 164 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 ETS2P15036 469 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 SDC1P18827 310 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 NF2P35240 595 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 CCT6AP40227 531 aaKnown RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 RPL13AP40429 203 aaKnown RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 DUSP3P51452 185 aaPredicted RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 RPL8P62917 257 aaKnown RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 OGDHQ02218 1023 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 NECTIN1Q15223 517 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 SLC25A52Q3SY17 297 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 SPANXN2Q5MJ10 180 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 LIPNQ5VXI9 398 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 BSPRYQ5W0U4 402 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 WSCD1Q658N2 575 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 H2BFWTQ7Z2G1 175 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 ARL14Q8N4G2 192 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 C15orf54Q8N8G6 183 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 FAM83FQ8NEG4 500 aaPredicted RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 OR2T6Q8NHC8 308 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 SSC4DQ8WTU2 575 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 NODALQ96S42 347 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 LGMNQ99538 433 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 CHP1Q99653 195 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 WACQ9BTA9 647 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 RPRD1BQ9NQG5 326 aaKnown RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 ELOVL2Q9NXB9 296 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 THAP10Q9P2Z0 257 aaPredicted RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 MLXQ9UH92 298 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 PPIAL4AQ9Y536 164 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 LAMC1P11047 1609 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 ADGRL2O95490 1459 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 PZPP20742 1482 aa4.74□□□□□ -1.65
COPS3-205ENST00000463097 NKTRP30414 1462 aaKnown RBP4.74□□□□□ -1.65
COPS3-205ENST00000463097 PTPRGP23470 1445 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 DAPK1P53355 1430 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 IGHV4-30-2A0A087WSY4 118 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 ARPC4-TTLL3A0A0A6YYG9 625 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 TEX48A0A1B0GUV7 120 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 POLR2DO15514 142 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 RS1O15537 224 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 PRKAB2O43741 272 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 DNAJB6O75190 326 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 CLDN9O95484 217 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 CRYGBP07316 175 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 ZSCAN5DPP0CG00 497 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 CASP14P31944 242 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 CDH5P33151 784 aaPredicted RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 NDUFV3P56181 108 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 TMEM50BP56557 158 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 BST2Q10589 180 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 IL18Q14116 193 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 LAGE3Q14657 143 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 SYCP1Q15431 976 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 NDUFA9Q16795 377 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 MS4A18Q3C1V0 323 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 MOGAT2Q3SYC2 334 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 MS4A13Q5J8X5 152 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 REP15Q6BDI9 236 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 RNASEKQ6P5S7 137 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 UQCC3Q6UW78 93 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 BZW1Q7L1Q6 419 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 TRIM69Q86WT6 500 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 FAM184AQ8NB25 1140 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 PRSS33Q8NF86 280 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 RFESDQ8TAC1 157 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 IL1F10Q8WWZ1 152 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 MCUR1Q96AQ8 359 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 ZNF501Q96CX3 271 aaPredicted RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 NSMCE3Q96MG7 304 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 C11orf70Q9BRQ4 267 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 NIPSNAP3BQ9BS92 247 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms