RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 IFI6P09912 130 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 GFAPP14136 432 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 GGT1P19440 569 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 ENPP1P22413 925 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 GIFP27352 417 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 CRABP2P29373 138 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 SPRP35270 261 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 FABP6P51161 128 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 CCNG1P51959 295 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 CARD18P57730 90 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 SLC18A2Q05940 514 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 FOXF1Q12946 379 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 IFT88Q13099 833 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 DOC2BQ14184 412 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 ACAP2Q15057 778 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 ARL13AQ5H913 290 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 TECRLQ5HYJ1 363 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 PDSS1Q5T2R2 415 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 GRTP1Q5TC63 336 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 SAMD14Q8IZD0 417 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 LILRA2Q8N149 483 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 OR4F6Q8NGB9 312 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 OR4C3Q8NH37 302 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 FAM110BQ8TC76 370 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 EPS8L3Q8TE67 593 aaKnown RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 FAM216AQ8WUB2 273 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 EXOSC8Q96B26 276 aaKnown RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 ZNF524Q96C55 264 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 MUCL1Q96DR8 90 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 TBL1XR1Q9BZK7 514 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 SHCBP1LQ9BZQ2 653 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 Q9N2J8 555 aa6.75□□□□□ -1.33
SMC3-202ENST00000462899 MYOZ1Q9NP98 299 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 TMEFF2Q9UIK5 374 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 TNPO3Q9Y5L0 923 aaKnown RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 NUP214P35658 2090 aaPredicted RBP6.75□□□□□ -1.33
SMC3-202ENST00000462899 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 LRP5LA4QPB2 252 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 ZNF724A8MTY0 619 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 STX16-NPEPL1H3BU86 382 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 PDLIM1O00151 329 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 PPP6CO00743 305 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 STX16O14662 325 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 TMPRSS2O15393 492 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 CYTIPO60759 359 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 KLHL2O95198 593 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 C2P06681 752 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 APOBEC3AP31941 199 aaPredicted RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 SFTPDP35247 375 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 GATA4P43694 442 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 PRIM2P49643 509 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 CLK3P49761 638 aaKnown RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 PSMD4P55036 377 aaKnown RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 CDH15P55291 814 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 SLC25A3Q00325 362 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 TRADDQ15628 312 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 CD226Q15762 336 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 GLE1Q53GS7 698 aaKnown RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 EXOSC6Q5RKV6 272 aaKnown RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 SH2D4BQ5SQS7 431 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 GALNT18Q6P9A2 607 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 SLC22A25Q6T423 547 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 TMEM107Q6UX40 140 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 RPS27LQ71UM5 84 aaKnown RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 CCDC91Q7Z6B0 441 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 ZAR1Q86SH2 424 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 SLC43A2Q8N370 569 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 PTGR2Q8N8N7 351 aaPredicted RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.332e-11■■■□□ 18.8
SMC3-202ENST00000462899 ZFP90Q8TF47 636 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 CDKL2Q92772 493 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 C3orf49Q96BT1 292 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 ZNF300Q96RE9 604 aaPredicted RBP6.74□□□□□ -1.33
SMC3-202ENST00000462899 C1QTNF3Q9BXJ4 246 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 KLHL9Q9P2J3 617 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 FKBP7Q9Y680 259 aa6.74□□□□□ -1.33
SMC3-202ENST00000462899 IGKV3D-15A0A087WSY6 115 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 A0A1W2PQD3 144 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 KIF2AO00139 706 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 PCDH7O60245 1069 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 RAD51DO75771 328 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 NKX2-2O95096 273 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ITGA5P08648 1049 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 HSD3B1P14060 373 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 CHN1P15882 459 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 DDCP20711 480 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ME2P23368 584 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 HSD3B2P26439 372 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 TYK2P29597 1187 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 NTF4P34130 210 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MPIP34949 423 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 EIF1P41567 113 aaKnown RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 ZNF83P51522 516 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms