RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 C1orf109Q9NX04 203 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 GIN1Q9NXP7 522 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 NPAP1Q9NZP6 1156 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 UQCRHLA0A096LP55 91 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 H3BQF6 201 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ZNF195O14628 629 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 LSM1O15116 133 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 CLOCKO15516 846 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PLIN3O60664 434 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 DNAJA2O60884 412 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 YES1P07947 543 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 UROSP10746 265 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PRKCAP17252 672 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 COX5AP20674 150 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ENPP1P22413 925 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 GPC1P35052 558 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 EIF1P41567 113 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 OR3A2P47893 321 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PRKAG1P54619 331 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ITGADQ13349 1161 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 MLC1Q15049 377 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 P2RY6Q15077 328 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 NDUFAF6Q330K2 333 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 RFTN2Q52LD8 501 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 SLC25A53Q5H9E4 307 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PDSS1Q5T2R2 415 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 Q6ZT83 130 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 FCRLAQ7L513 359 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 MTERF4Q7Z6M4 381 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 FBXO27Q8NI29 283 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PSMA8Q8TAA3 256 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 GPR119Q8TDV5 335 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ZFP90Q8TF47 636 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 CDS1Q92903 461 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 KISS1RQ969F8 398 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 CCDC126Q96EE4 140 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ZBED6CLQ96FA7 236 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 TRMT61AQ96FX7 289 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 TSSK3Q96PN8 268 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 STACQ99469 402 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 BTBD2Q9BX70 525 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 C12orf65Q9H3J6 166 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 ESRP2Q9H6T0 727 aaKnown RBP9.88□□□□□ -0.83
PTPN7-204ENST00000462815 DUSP22Q9NRW4 184 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 OXSMQ9NWU1 459 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 PRSS50Q9UI38 385 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 KCNE3Q9Y6H6 103 aa9.88□□□□□ -0.83
PTPN7-204ENST00000462815 CADP27708 2225 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 IGHV4-30-2A0A087WSY4 118 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 IGHV3-15A0A0B4J1V0 119 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 NPIPA5A0A0B4J1W7 369 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 NPIPA7E9PJI5 369 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 SCDO00767 359 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 SMAD9O15198 467 aaKnown RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 RGS14O43566 566 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 AKAP10O43572 662 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 GPRIN2O60269 458 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 SEC22BO75396 215 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PRKD3O94806 890 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PGM3O95394 542 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 H6PDO95479 791 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 HMGN2P05204 90 aaKnown RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 ALOX5P09917 674 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PABPC4LP0CB38 370 aaKnown RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 NPIPA8P0DM63 369 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 MYL2P10916 166 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 H2AFXP16104 143 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 EFNA1P20827 205 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 ME2P23368 584 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 IL32P24001 234 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 SERPINB4P48594 390 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 RNF144AP50876 292 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 P2RX1P51575 399 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 SUMO3P55854 103 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 NAA20P61599 178 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 POU6F2P78424 691 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 UGT3A2Q3SY77 523 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 TMEM201Q5SNT2 666 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 GTF2IRD2BQ6EKJ0 949 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 ALKBH2Q6NS38 261 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 TRMT10CQ7L0Y3 403 aaKnown RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 BHLHA15Q7RTS1 189 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 GTF2IRD2Q86UP8 949 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 COX18Q8N8Q8 333 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 OR10H5Q8NGA6 315 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 CLHC1Q8NHS4 586 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 ZFP28Q8NHY6 868 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PPCDCQ96CD2 204 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PIGUQ9H490 435 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 GPATCH2Q9NW75 528 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 PSMC3IPQ9P2W1 217 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-204ENST00000462815 DCDC2Q9UHG0 476 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 BAIAP2L1Q9UHR4 511 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 ATP6V1HQ9UI12 483 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 B3GALT5Q9Y2C3 310 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 CARD8Q9Y2G2 431 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 DNAJC15Q9Y5T4 150 aa9.87□□□□□ -0.83
PTPN7-204ENST00000462815 A0A1W2PP18 115 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms