RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 CNIH4Q9P003 139 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 MED11Q9P086 117 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 PPP4R1LQ9P1A2 415 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 ZMIZ1Q9ULJ6 1067 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
PBRM1-219ENST00000462207 ACAA2P42765 397 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 RCN1Q15293 331 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 COL28A1Q2UY09 1125 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 LILRA2Q8N149 483 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 WDSUB1Q8N9V3 476 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 JSRP1Q96MG2 331 aaPredicted RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 MCHR1Q99705 422 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 LAT2Q9GZY6 243 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 VNN3Q9NY84 501 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 RHCGQ9UBD6 479 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 FBXL2Q9UKC9 423 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 ICAM5Q9UMF0 924 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 PCDHGA9Q9Y5G4 932 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 CPSF4LA6NMK7 179 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 FFAR1O14842 300 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 WISP1O95388 367 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 TNFSF10P50591 281 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 EPS8Q12929 822 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 SNTA1Q13424 505 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 GANABQ14697 944 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 TOMM34Q15785 309 aaPredicted RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 HMBOX1Q6NT76 420 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 SLC30A6Q6NXT4 461 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 PHF10Q8WUB8 498 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 LRTOMTQ8WZ04 291 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 ZNF300Q96RE9 604 aaPredicted RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 RNPEPL1Q9HAU8 725 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 EXOSC3Q9NQT5 275 aaKnown RBP12.29□□□□□ -0.44
PBRM1-219ENST00000462207 ARMC1Q9NVT9 282 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 ENPP4Q9Y6X5 453 aa12.29□□□□□ -0.44
PBRM1-219ENST00000462207 ANKRD33BA6NCL7 494 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 LRRC3CA6NJW4 275 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 CDC40O60508 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 NTN1O95631 604 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 SP1P08047 785 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 FAM87AP0C7U9 286 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 TCEA1P23193 301 aaKnown RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 RFC3P40938 356 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 MASP1P48740 699 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 PIN1Q13526 163 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 ZFP1Q6P2D0 407 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 GALNTL5Q7Z4T8 443 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 AMIGO2Q86SJ2 522 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 MISPQ8IVT2 679 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 OR2M3Q8NG83 312 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 POP5Q969H6 163 aaKnown RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 ABHD17AQ96GS6 310 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 FRMD6Q96NE9 622 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 PKP2Q99959 881 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 DSN1Q9H410 356 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 TUBA8Q9NY65 449 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 NKX1-2Q9UD57 310 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 TESQ9UGI8 421 aaKnown RBP12.28□□□□□ -0.44
PBRM1-219ENST00000462207 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 TESMINQ9Y4I5 508 aa12.28□□□□□ -0.44
PBRM1-219ENST00000462207 A6NHS1 94 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 SNPHO15079 494 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 AHCYL1O43865 530 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 NME2P1O60361 137 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.44
PBRM1-219ENST00000462207 PRSS23O95084 383 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 NUDT14O95848 222 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 THY1P04216 161 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 CNR1P21554 472 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 NME2P22392 152 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 MST1P26927 711 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 P2RX1P51575 399 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 PPP1R8Q12972 351 aaKnown RBP12.27□□□□□ -0.44
PBRM1-219ENST00000462207 ZSWIM7Q19AV6 140 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 LINC00303Q3SY05 128 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 ZNF766Q5HY98 468 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 ENTPD8Q5MY95 495 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 SLC25A25Q6KCM7 469 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 AAGABQ6PD74 315 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 ARSKQ6UWY0 536 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 PLEKHM3Q6ZWE6 761 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 ZNF550Q7Z398 422 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 PIWIL3Q7Z3Z3 882 aaKnown RBP12.27□□□□□ -0.44
PBRM1-219ENST00000462207 SULF2Q8IWU5 870 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 CADM2Q8N3J6 435 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 OR2M7Q8NG81 312 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 OR5W2Q8NH69 310 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 SCMH1Q96GD3 660 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 C5orf34Q96MH7 638 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 GNRHR2Q96P88 292 aa12.27□□□□□ -0.44
PBRM1-219ENST00000462207 NPAS1Q99742 590 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms