RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ZNF607Q96SK3 696 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GPATCH1Q9BRR8 931 aaKnown RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 UGT2B28Q9BY64 529 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PRDM14Q9GZV8 571 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TP63Q9H3D4 680 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 MED17Q9NVC6 651 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TAGLN3Q9UI15 199 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PRDM4Q9UKN5 801 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 VDAC3Q9Y277 283 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZNF443Q9Y2A4 671 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 RPH3AQ9Y2J0 694 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SLC6A5Q9Y345 797 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GPC6Q9Y625 555 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 FASNP49327 2511 aaKnown RBP10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TENM4Q6N022 2769 aa10.57□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CDHR4A6H8M9 788 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PRORSD1PA6NEY8 169 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CLDN24A6NM45 220 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 OIP5O43482 229 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 DNAJA2O60884 412 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 WDR1O75083 606 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SERPINB7O75635 380 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CYP7B1O75881 506 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 HOXD4P09016 255 aaPredicted RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 LINGO3P0C6S8 592 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PABPC4LP0CB38 370 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GABRA1P14867 456 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 UQCRBP14927 111 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 BMP7P18075 431 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PGCP20142 388 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ADH6P28332 368 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PRKAR1BP31321 381 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PCGF2P35227 344 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PTGER4P35408 488 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GZMMP51124 257 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 MNAT1P51948 309 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 B3GALT5-AS1P59052 145 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 EEF1A1P68104 462 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SF3B4Q15427 424 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 C3AR1Q16581 482 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 VMACQ2NL98 169 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TMEM44Q2T9K0 475 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PLPPR5Q32ZL2 321 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 NDUFAF6Q330K2 333 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GXYLT1Q4G148 440 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 MRPL2Q5T653 305 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 C1QL3Q5VWW1 255 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 C8orf82Q6P1X6 216 aaPredicted RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 MTFR2Q6P444 385 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ARSKQ6UWY0 536 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 HMGN2P46Q86SG4 172 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CALHM3Q86XJ0 350 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 DOLPP1Q86YN1 238 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GRAMD2AQ8IUY3 354 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZZZ3Q8IYH5 903 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZNF440Q8IYI8 595 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 BHLHE22Q8NFJ8 381 aaPredicted RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 GPR119Q8TDV5 335 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 RELTQ969Z4 430 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TIMP4Q99727 224 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 NDE1Q9NXR1 346 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 DNAJB12Q9NXW2 375 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 STOML1Q9UBI4 398 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TINAGQ9UJW2 476 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SLC5A6Q9Y289 635 aa10.56□□□□□ -0.72
TRAF3IP1-204ENST00000462122 OR2M5A3KFT3 312 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 FAM220BPB1ANY3 271 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 E9PLN8 166 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ETV2O00321 342 aaPredicted RBP10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 FAAHO00519 579 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ZNHIT1O43257 154 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 LRRTM2O43300 516 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PEPDP12955 493 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CPN1P15169 458 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TCEA1P23193 301 aaKnown RBP10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ELK4P28324 431 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 LHX2P50458 406 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SLC7A2P52569 658 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PER3P56645 1201 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PLAURQ03405 335 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 VEZF1Q14119 521 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 QPRTQ15274 297 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 BCL2A1Q16548 175 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 EMC4Q5J8M3 183 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 DHRS4L2Q6PKH6 230 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 PATL1Q86TB9 770 aaKnown RBP10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SLC15A3Q8IY34 581 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 FAM26EQ8N5C1 309 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 OR2T12Q8NG77 320 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 OR5M9Q8NGP3 310 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 TMEM234Q8WY98 164 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 ST8SIA1Q92185 356 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 SLC35B4Q969S0 331 aa10.55□□□□□ -0.72
TRAF3IP1-204ENST00000462122 MRGPRX4Q96LA9 322 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms