RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C22orf34Q6ZV56 151 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 OR5AK3PQ8NH89 298 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 PPP1R14CQ8TAE6 165 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 OSTF1Q92882 214 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 REXO5Q96IC2 774 aaKnown RBP20.35■□□□□ 0.85
PTPN4-207ENST00000460162 OR7D2Q96RA2 312 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 CCL19Q99731 98 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 OR10A4Q9H209 315 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 GSX1Q9H4S2 264 aaPredicted RBP20.35■□□□□ 0.85
PTPN4-207ENST00000460162 TIGARQ9NQ88 270 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 CARD8Q9Y2G2 431 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 DTNAQ9Y4J8 743 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 KCNE3Q9Y6H6 103 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 NAV3Q8IVL0 2385 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 OIP5O43482 229 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 AK1P00568 194 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 THBDP07204 575 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 SHC1P29353 583 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 CLDN8P56748 225 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 CARD18P57730 90 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 RNPS1Q15287 305 aaKnown RBP20.34■□□□□ 0.85
PTPN4-207ENST00000460162 Q5PR19 223 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 ANKRD34AQ69YU3 496 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 NUDCD3Q8IVD9 361 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 MREGQ8N565 214 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 FBXO27Q8NI29 283 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 NUDT8Q8WV74 236 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 MRGPRX4Q96LA9 322 aa20.34■□□□□ 0.85
PTPN4-207ENST00000460162 NSD1Q96L73 2696 aaPredicted RBP20.34■□□□□ 0.85
PTPN4-207ENST00000460162 ARID1AO14497 2285 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 DSCAMO60469 2012 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.33■□□□□ 0.85
PTPN4-207ENST00000460162 SERPINE1P05121 402 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 PRKCAP17252 672 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 HOXB4P17483 251 aaPredicted RBP20.33■□□□□ 0.85
PTPN4-207ENST00000460162 PSMB1P20618 241 aaKnown RBP20.33■□□□□ 0.85
PTPN4-207ENST00000460162 NR1H2P55055 460 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 SELENBP1Q13228 472 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 P3H2Q8IVL5 708 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 ZNF614Q8N883 585 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 OR5D16Q8NGK9 328 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 ZFP90Q8TF47 636 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 ARSGQ96EG1 525 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 PKNOX2Q96KN3 472 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 NMUR2Q9GZQ4 415 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 ZNF395Q9H8N7 513 aaPredicted RBP20.33■□□□□ 0.85
PTPN4-207ENST00000460162 GP6Q9HCN6 339 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 KLHL13Q9P2N7 655 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 GPR52Q9Y2T5 361 aa20.33■□□□□ 0.85
PTPN4-207ENST00000460162 HEATR5AQ86XA9 2040 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 DUXAA6NLW8 204 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 GTPBP1O00178 669 aaKnown RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 RNASET2O00584 256 aaKnown RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF195O14628 629 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF264O43296 627 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 EIF4E2O60573 245 aaKnown RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 SNUPNO95149 360 aaKnown RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 NTN1O95631 604 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 UBL4AP11441 157 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 RNF144AP50876 292 aaPredicted RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 PDCD2Q16342 344 aaPredicted RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 KRT71Q3SY84 523 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 SLC25A53Q5H9E4 307 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 TMCO5AQ8N6Q1 288 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 TOR1AIP2Q8NFQ8 470 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 GPR119Q8TDV5 335 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 ABHD3Q8WU67 409 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 SDF2Q99470 211 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 SRXN1Q9BYN0 137 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 ACTR6Q9GZN1 396 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 C12orf49Q9H741 205 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 COQ10BQ9H8M1 238 aa20.32■□□□□ 0.84
PTPN4-207ENST00000460162 SSU72Q9NP77 194 aaKnown RBP20.32■□□□□ 0.84
PTPN4-207ENST00000460162 RNF103-CHMP3A0A140T963 221 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 ETV2O00321 342 aaPredicted RBP20.31■□□□□ 0.84
PTPN4-207ENST00000460162 BIRC5O15392 142 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 EFNA2O43921 213 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 INHBBP09529 407 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 RPS26P62854 115 aaKnown RBP20.31■□□□□ 0.84
PTPN4-207ENST00000460162 CBFBQ13951 182 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 PGS1Q32NB8 556 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 NDUFAF6Q330K2 333 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 TMEM201Q5SNT2 666 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 CLECL1Q8IZS7 167 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 KIRREL3Q8IZU9 778 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF781Q8N8C0 355 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 OR8J2Q8NGG1 315 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 OR5W2Q8NH69 310 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 ROBO4Q8WZ75 1007 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 SLC35G5Q96KT7 338 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 TACO1Q9BSH4 297 aaKnown RBP20.31■□□□□ 0.84
PTPN4-207ENST00000460162 SERHL2Q9H4I8 314 aa20.31■□□□□ 0.84
PTPN4-207ENST00000460162 TM9SF1O15321 606 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 RGS16O15492 202 aaPredicted RBP20.3■□□□□ 0.84
PTPN4-207ENST00000460162 KLF4O43474 513 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 ITM2AO43736 263 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 MYZAPP0CAP1 466 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 MATN1P21941 496 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 ADSLP30566 484 aaPredicted RBP20.3■□□□□ 0.84
PTPN4-207ENST00000460162 CCR4P51679 360 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms