RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 REV1Q9UBZ9 1251 aa22.4■■□□□ 1.18
U2AF1-204ENST00000459639 MYRFQ9Y2G1 1151 aa22.4■■□□□ 1.18
U2AF1-204ENST00000459639 HEATR5AQ86XA9 2040 aa22.4■■□□□ 1.18
U2AF1-204ENST00000459639 NSG1A0A0A6YYJ2 146 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 A0A1B0GWA3 101 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 EIF4E1BA6NMX2 242 aaKnown RBP22.39■■□□□ 1.18
U2AF1-204ENST00000459639 GTPBP1O00178 669 aaKnown RBP22.39■■□□□ 1.18
U2AF1-204ENST00000459639 CEACAM1P13688 526 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 OSMP13725 252 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 GSTM3P21266 225 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 TMED10P49755 219 aaKnown RBP22.39■■□□□ 1.18
U2AF1-204ENST00000459639 GNPDA2Q8TDQ7 276 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 TBL1XR1Q9BZK7 514 aa22.39■■□□□ 1.18
U2AF1-204ENST00000459639 KRCC1Q9NPI7 259 aaPredicted RBP22.39■■□□□ 1.18
U2AF1-204ENST00000459639 KNTC1P50748 2209 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 TM4SF5O14894 197 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 FADS1O60427 444 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 RAD1O60671 282 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 EVI2BP34910 448 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 NUP107P57740 925 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 ISL1P61371 349 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 LSM11P83369 360 aaKnown RBP eCLIP22.39■■□□□ 1.17
U2AF1-204ENST00000459639 TMEM154Q6P9G4 183 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 ASCL5Q7RTU5 278 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 RNF113BQ8IZP6 322 aaKnown RBP22.39■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF786Q8N393 782 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 SLC15A4Q8N697 577 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 LAT2Q9GZY6 243 aa22.39■■□□□ 1.17
U2AF1-204ENST00000459639 ZBTB20Q9HC78 741 aaPredicted RBP22.39■■□□□ 1.17
U2AF1-204ENST00000459639 PTPRBP23467 1997 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 STMND1H3BQB6 276 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 TERTO14746 1132 aaKnown RBP22.38■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF354AO60765 605 aaPredicted RBP22.38■■□□□ 1.17
U2AF1-204ENST00000459639 OMPP47874 163 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 CRISP1P54107 249 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 ALDH6A1Q02252 535 aaKnown RBP22.38■■□□□ 1.17
U2AF1-204ENST00000459639 ISLR2Q6UXK2 745 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 WDR88Q6ZMY6 472 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 FBLIM1Q8WUP2 373 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 ARSGQ96EG1 525 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 MPP4Q96JB8 637 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 YTHDF1Q9BYJ9 559 aaKnown RBP22.38■■□□□ 1.17
U2AF1-204ENST00000459639 RPS6KB2Q9UBS0 482 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 CARD8Q9Y2G2 431 aa22.38■■□□□ 1.17
U2AF1-204ENST00000459639 NDUFB5O43674 189 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 EIF4E2O60573 245 aaKnown RBP22.37■■□□□ 1.17
U2AF1-204ENST00000459639 CHMP24386 653 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 OTX2P32243 289 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 GGT2P36268 569 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 DLSTP36957 453 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 GSSP48637 474 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 COPZ1P61923 177 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 GABREP78334 506 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 KCTD21Q4G0X4 260 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 ULK3Q6PHR2 472 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 NUP54Q7Z3B4 507 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 PRICKLE2Q7Z3G6 844 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 NRMQ8IXM6 262 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 CADM2Q8N3J6 435 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 GRHL3Q8TE85 626 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 TMEM239Q8WW34 195 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 HGDQ93099 445 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 TMCO6Q96DC7 493 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 HS6ST2Q96MM7 605 aa22.37■■□□□ 1.17
U2AF1-204ENST00000459639 OIP5O43482 229 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 NTN1O95631 604 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 LINGO3P0C6S8 592 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 CD82P27701 267 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 RBM34P42696 430 aaKnown RBP22.36■■□□□ 1.17
U2AF1-204ENST00000459639 SLC6A8P48029 635 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 FBXW4P57775 412 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 IL5RAQ01344 420 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 CD47Q08722 323 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 TSPAN31Q12999 210 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 ALG10BQ5I7T1 473 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 LYPD8Q6UX82 237 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 MARCH3Q86UD3 253 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 TMCO5AQ8N6Q1 288 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 DNAJA4Q8WW22 397 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-204ENST00000459639 TTC9Q92623 222 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 RTN4RQ9BZR6 473 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF160Q9HCG1 818 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 SELENONQ9NZV5 590 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 ZAR1LA6NP61 321 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 OR2J2O76002 312 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 HPP00738 406 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 FBXO45P0C2W1 286 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 FPR3P25089 353 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF117Q03924 483 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 CBLN3Q6UW01 205 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 Q6ZPB1 254 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-204ENST00000459639 MISPQ8IVT2 679 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 RNF217Q8TC41 542 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 FAM46AQ96IP4 442 aaKnown RBP22.36■■□□□ 1.17
U2AF1-204ENST00000459639 GPA33Q99795 319 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF426Q9BUY5 554 aa22.36■■□□□ 1.17
U2AF1-204ENST00000459639 RYDENQ9NUL5 291 aaKnown RBP22.36■■□□□ 1.17
U2AF1-204ENST00000459639 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 KLF4O43474 513 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 PIP5K1CO60331 668 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms