RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TBCELQ5QJ74 424 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 INTS11Q5TA45 600 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PRAMEF8Q5VWM4 474 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PRAMEF7Q5VXH5 474 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 AP1ARQ63HQ0 302 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 TIGD3Q6B0B8 471 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PGM2L1Q6PCE3 622 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 ENPP6Q6UWR7 440 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 CCDC80Q76M96 950 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PATL1Q86TB9 770 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 YRDCQ86U90 279 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PLCZ1Q86YW0 608 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SLC30A8Q8IWU4 369 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 TMEM251Q8N6I4 163 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 OR4K17Q8NGC6 315 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 B4GALNT2Q8NHY0 566 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 UTP4Q969X6 686 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 PNPLA2Q96AD5 504 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 NTNG2Q96CW9 530 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 TMEM41AQ96HV5 264 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 ZNF597Q96LX8 424 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SPATA5L1Q9BVQ7 753 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 CACYBPQ9HB71 228 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SDHAF3Q9NRP4 125 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 TNFRSF10DQ9UBN6 386 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SLC7A8Q9UHI5 535 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 NPIPA1Q9UND3 350 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 VDAC3Q9Y277 283 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 IFT52Q9Y366 437 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SH3GLB1Q9Y371 365 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 SNX13Q9Y5W8 968 aa7.9□□□□□ -1.14
CLTCL1-204ENST00000458188 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 CDHR4A6H8M9 788 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 CDK2AP1O14519 115 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ACOT8O14734 319 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SUV39H1O43463 412 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 TPST2O60704 377 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 PRKD3O94806 890 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 GLSO94925 669 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 FESP07332 822 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SFTPCP11686 197 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 HK1P19367 917 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 CCNA2P20248 432 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 DPP4P27487 766 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 PRKAR1BP31321 381 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 IDH2P48735 452 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SELENOWP63302 87 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 HSF1Q00613 529 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ALDH6A1Q02252 535 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SKP2Q13309 424 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 TMEM81Q6P7N7 255 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 POMZP3Q6PJE2 187 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 DHRS4L2Q6PKH6 230 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 FKBP9P1Q75LS8 142 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 DHFR2Q86XF0 187 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ARHGAP24Q8N264 748 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 CADM2Q8N3J6 435 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ZFP62Q8NB50 900 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 FAM98AQ8NCA5 519 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ATP6V1C2Q8NEY4 427 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 BHLHE22Q8NFJ8 381 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 TNIP2Q8NFZ5 429 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SNRNP40Q96DI7 357 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 DNAJA3Q96EY1 480 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 HSH2DQ96JZ2 352 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 NSMCE2Q96MF7 247 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 FRMD6Q96NE9 622 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SEPHS2Q99611 448 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 PINK1Q9BXM7 581 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 LAT2Q9GZY6 243 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SLC6A15Q9H2J7 730 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ASF1BQ9NVP2 202 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 DKKL1Q9UK85 242 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SLC13A4Q9UKG4 626 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 ICAM5Q9UMF0 924 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 BOKQ9UMX3 212 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 POMPQ9Y244 141 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 C15orf41Q9Y2V0 281 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 SLC6A5Q9Y345 797 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 LIPGQ9Y5X9 500 aa7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 TNRC6AQ8NDV7 1962 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-204ENST00000458188 hCG_2039718K7EN88 272 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 TFECO14948 347 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 ZIC3O60481 467 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 EIF4E2O60573 245 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 CBR3O75828 277 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 NTN1O95631 604 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 LGI1O95970 557 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 IFNA14P01570 189 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 MT-ND1P03886 318 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 THBS1P07996 1170 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 LINGO3P0C6S8 592 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 ZNF24P17028 368 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 IL11P20809 199 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 PTNP21246 168 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 FUT4P22083 530 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 ADH7P40394 386 aa7.88□□□□□ -1.15
CLTCL1-204ENST00000458188 ACAA2P42765 397 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms