RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 SQLEQ14534 574 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 TMEM44Q2T9K0 475 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 COX20Q5RI15 118 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 ADGRE4PQ86SQ3 457 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 GCNT2Q8N0V5 402 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 ANKFN1Q8N957 763 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 ATP6V1C2Q8NEY4 427 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 FBXO27Q8NI29 283 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 GPR119Q8TDV5 335 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 OIT3Q8WWZ8 545 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 SPDL1Q96EA4 605 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 THUMPD3Q9BV44 507 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 LAT2Q9GZY6 243 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 RAD21L1Q9H4I0 556 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 TMEM185BQ9H7F4 350 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 MTHFD2LQ9H903 347 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 CACYBPQ9HB71 228 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 PAQR5Q9NXK6 330 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 CLCF1Q9UBD9 225 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 SLC35A3Q9Y2D2 325 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 GPC6Q9Y625 555 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 HCFC1P51610 2035 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 KIAA0513O60268 411 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 TGM6O95932 706 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 VIMP08670 466 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 LINGO3P0C6S8 592 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 PGCP20142 388 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 ADH6P28332 368 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 MRPL19P49406 292 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 ATP4BP51164 291 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 DSTNP60981 165 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 FOXF1Q12946 379 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 FOXF2Q12947 444 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 PON3Q15166 354 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 BLOC1S3Q6QNY0 202 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 FRRS1Q6ZNA5 592 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 LRRC74BQ6ZQY2 392 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 HMGN2P46Q86SG4 172 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 LILRA2Q8N149 483 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 RELL2Q8NC24 303 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF563Q8TA94 476 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 TMEM234Q8WY98 164 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 SFXN3Q9BWM7 321 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 SAP130Q9H0E3 1048 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 NPDC1Q9NQX5 325 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 SLC6A13Q9NSD5 602 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 THUMPD1Q9NXG2 353 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 CALML5Q9NZT1 146 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 P2RX2Q9UBL9 471 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 KCNE5Q9UJ90 142 aa16.28■□□□□ 0.2
PDLIM2-215ENST00000456545 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 GJE1A6NN92 205 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 CLIC1O00299 241 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 SYT5O00445 386 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 ETFAP13804 333 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 IL7RP16871 459 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 SSTR2P30874 369 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 SFTPDP35247 375 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 CPA2P48052 419 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 KCNJ10P78508 379 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 MYBPHQ13203 477 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 FGFBP1Q14512 234 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 QPRTQ15274 297 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 TOMM34Q15785 309 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 MAPK14Q16539 360 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 GTDC1Q4AE62 458 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 HBMQ6B0K9 141 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 ESPNLQ6ZVH7 1005 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 DMRTC2Q8IXT2 367 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 METTL25Q8N6Q8 603 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 CNEP1R1Q8N9A8 125 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 FIG4Q92562 907 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 RNASE6Q93091 150 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 ZG16BQ96DA0 208 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 AURKBQ96GD4 344 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 REXO5Q96IC2 774 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF845Q96IR2 970 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 MRGPRX4Q96LA9 322 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 NPAS1Q99742 590 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 MED4Q9NPJ6 270 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 TIGARQ9NQ88 270 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 SERINC1Q9NRX5 453 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 TMEM45AQ9NWC5 275 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 FOXD3Q9UJU5 478 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 MCTS1Q9ULC4 181 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 L3MBTL1Q9Y468 752 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF175Q9Y473 711 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 PCDHB14Q9Y5E9 798 aa16.27■□□□□ 0.2
PDLIM2-215ENST00000456545 DOCK7Q96N67 2140 aa16.27■□□□□ 0.19
PDLIM2-215ENST00000456545 A0A096LPI6 279 aa16.26■□□□□ 0.19
PDLIM2-215ENST00000456545 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.26■□□□□ 0.19
PDLIM2-215ENST00000456545 PRAMEF27A3QJZ7 478 aa16.26■□□□□ 0.19
PDLIM2-215ENST00000456545 TNFSF11O14788 317 aa16.26■□□□□ 0.19
PDLIM2-215ENST00000456545 SMNDC1O75940 238 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM2-215ENST00000456545 PLGP00747 810 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms