RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ZNF704Q6ZNC4 412 aaPredicted RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 PAQR9Q6ZVX9 377 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 OR1F2PQ96R84 312 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 NAA11Q9BSU3 229 aaPredicted RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF334Q9HCZ1 680 aaPredicted RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 A0A0U1RQS6 177 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 KCNK5O95279 499 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 SNAPINO95295 136 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 FUT1P19526 365 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 LIPAP38571 399 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 GRM7Q14831 915 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 KDM4DQ6B0I6 523 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 OR4F15Q8NGB8 312 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 OR5AR1Q8NGP9 310 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 SLC22A8Q8TCC7 542 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 MED30Q96HR3 178 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 CPEB1Q9BZB8 566 aaKnown RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
SEC16A-207ENST00000453963 MYO7AQ13402 2215 aa11.31□□□□□ -0.6
SEC16A-207ENST00000453963 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 H0YIV9 168 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 H3BUI4 141 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 J3KTA2 159 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 GBX1Q14549 363 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 UNQ6126/PRO20091Q6UXV3 157 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF852Q6ZMS4 543 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SLC39A13Q96H72 371 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SERINC2Q96SA4 455 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 GAPDHSO14556 408 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SMAD6O43541 496 aaKnown RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 FZD7O75084 574 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 PNMTP11086 282 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 AHRP35869 848 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 RGRP47804 291 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF542PQ5EBM4 170 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 PIP5KL1Q5T9C9 394 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 OR9A2Q8NGT5 310 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 FBXO8Q9NRD0 319 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 RCE1Q9Y256 329 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 FOXE1O00358 373 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SRPX2O60687 465 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SLC35A2P78381 396 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 OPCMLQ14982 345 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 PTPRRQ15256 657 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 MPP7Q5T2T1 576 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 ZC3H14Q6PJT7 736 aaKnown RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 FIGLAQ6QHK4 219 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SERPINA12Q8IW75 414 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 L3MBTL4Q8NA19 623 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SMAP2Q8WU79 429 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 METTL17Q9H7H0 456 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 TMPRSS11EQ9UL52 423 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 CIB4A0PJX0 185 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 A6NIN4 97 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 POLR1CO15160 346 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 FABP7O15540 132 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 GPX2P18283 190 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SLC1A3P43003 542 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SHC2P98077 582 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 BTN1A1Q13410 526 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 MFSD13AQ14CX5 517 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 AWAT2Q6E213 333 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 NLRP8Q86W28 1048 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 HORMAD2Q8N7B1 307 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 SLC25A18Q9H1K4 315 aa11.3□□□□□ -0.6
SEC16A-207ENST00000453963 UBE2J1Q9Y385 318 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-207ENST00000453963 TRBV4-1A0A0J9YWV2 114 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 HOXB9P17482 250 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 MTNR1BP49286 362 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FGL2Q14314 439 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FCRLBQ6BAA4 426 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SLC16A9Q7RTY1 509 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SVBPQ8N300 66 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF480Q8WV37 535 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 OR5M11Q96RB7 305 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 HCFC1R1Q9NWW0 138 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 POLHQ9Y253 713 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CDHR4A6H8M9 788 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms