RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 THAP2Q9H0W7 228 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SGK2Q9HBY8 427 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 INTS9Q9NV88 658 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ZNF319Q9P2F9 582 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TEKT2Q9UIF3 430 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GGA2Q9UJY4 613 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 FBXL4Q9UKA2 621 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PRDM4Q9UKN5 801 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 HPCAL4Q9UM19 191 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SCML1Q9UN30 329 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 COQ4Q9Y3A0 265 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 COL5A1P20908 1838 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 CACNA1BQ00975 2339 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 MAP1BP46821 2468 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 FAM230AA0A1W2PPH8 454 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 A0A1W2PS18 150 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 TRIM49BA6NDI0 452 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ZSCAN5CA6NGD5 496 aaPredicted RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 YJEFN3A6XGL0 299 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ANKRD30BLA7E2S9 258 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 E7ENQ6 273 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 F5H5T6 163 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 YKT6O15498 198 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 BUB3O43684 328 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 KRT86O43790 486 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 PRKNO60260 465 aaPredicted RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 GLRA3O75311 464 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 RRASP10301 218 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 THRBP10828 461 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CYP11B1P15538 503 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 DRD5P21918 477 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 GPX3P22352 226 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 IL4RP24394 825 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CTNNA2P26232 953 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 PBLDP30039 288 aaPredicted RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CSKP41240 450 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ACADSBP45954 432 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 NR2C2P49116 596 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CSNK1EP49674 416 aaKnown RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 METAP1P53582 386 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 LIMK2P53671 638 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 DLX5P56178 289 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 OR1D5P58170 312 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CNTN1Q12860 1018 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ILF3Q12906 894 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 KRT81Q14533 505 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 EXOSC7Q15024 291 aaKnown RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 XKR6Q5GH73 641 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 TECRLQ5HYJ1 363 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 IL23RQ5VWK5 629 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 TMEM215Q68D42 235 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 HIST2H2AA3Q6FI13 130 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 RTL6Q6ICC9 239 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 RFWD3Q6PCD5 774 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 FAM159AQ6UWV7 190 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CDHR3Q6ZTQ4 885 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CYP4V2Q6ZWL3 525 aaPredicted RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ISCA2Q86U28 154 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 MMAAQ8IVH4 418 aaKnown RBP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ATP6V0D2Q8N8Y2 350 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 SLC5A11Q8WWX8 675 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 SHC3Q92529 594 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 MCHR2Q969V1 340 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 AZIN2Q96A70 460 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 TMEM45BQ96B21 275 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 BIRC7Q96CA5 298 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 SCRN2Q96FV2 425 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 HSFY1Q96LI6 401 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF354BQ96LW1 612 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 S1PR3Q99500 378 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 FICDQ9BVA6 458 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 SLC26A1Q9H2B4 701 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 GORASP2Q9H8Y8 452 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 TM9SF3Q9HD45 589 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 PRSS16Q9NQE7 514 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC00393-202ENST00000452852 ATAD3AQ9NVI7 634 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 FBXL12Q9NXK8 326 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 EXTL2Q9UBQ6 330 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 STOML2Q9UJZ1 356 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 CLEC4EQ9ULY5 219 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 NCOR2Q9Y618 2525 aa3.77□□□□□ -1.81
LINC00393-202ENST00000452852 SHROOM3Q8TF72 1996 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 NUMA1Q14980 2115 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TDRD6O60522 2096 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 A0A087WYN8 130 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 GOLGA6L7A0A1B0GV03 622 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 SERINC4A6NH21 518 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CYSRT1A8MQ03 144 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 LGALS8O00214 317 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CHEK1O14757 476 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 MAGEC1O60732 1142 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CYTIPO60759 359 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CSO75390 466 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 LDOC1O95751 146 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 MBD3O95983 291 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 IL1BP01584 269 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 IGKV3-20P01619 116 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms