RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 OR2M3Q8NG83 312 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 GPR32P1Q8NGA4 272 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 OR5W2Q8NH69 310 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 B4GALNT2Q8NHY0 566 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 LZICQ8WZA0 190 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CCDC124Q96CT7 223 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 NSMCE2Q96MF7 247 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 GNRHR2Q96P88 292 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF703Q9H7S9 590 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 PTGES2Q9H7Z7 377 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 RLIMQ9NVW2 624 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ADPRHL2Q9NX46 363 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 QPCTLQ9NXS2 382 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 KLHL28Q9NXS3 571 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 B4GALT7Q9UBV7 327 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SLC7A8Q9UHI5 535 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 SAMD4AQ9UPU9 718 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 CARD8Q9Y2G2 431 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
SCN9A-204ENST00000452182 MRPS18CQ9Y3D5 142 aaKnown RBP10.55□□□□□ -0.72
SCN9A-204ENST00000452182 ACOT7O00154 380 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 FAAHO00519 579 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 GNB5O14775 395 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 BCAS1O75363 584 aaPredicted RBP10.54□□□□□ -0.72
SCN9A-204ENST00000452182 EPPINO95925 133 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 SERPINA1P01009 418 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 CRYABP02511 175 aaKnown RBP10.54□□□□□ -0.72
SCN9A-204ENST00000452182 FESP07332 822 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 UBTFL6P0CB48 400 aaPredicted RBP10.54□□□□□ -0.72
SCN9A-204ENST00000452182 SLC6A8P48029 635 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 GLIPR1L2Q4G1C9 344 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 OR5M10Q6IEU7 315 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF550Q7Z398 422 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 DHFR2Q86XF0 187 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 JSRP1Q96MG2 331 aaPredicted RBP10.54□□□□□ -0.72
SCN9A-204ENST00000452182 TAAR6Q96RI8 345 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 MED11Q9P086 117 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 ANAPC2Q9UJX6 822 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 FBXL2Q9UKC9 423 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 SLC13A4Q9UKG4 626 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 POMPQ9Y244 141 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 HRH3Q9Y5N1 445 aa10.54□□□□□ -0.72
SCN9A-204ENST00000452182 ANKUB1A6NFN9 424 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 C17orf51A8MQB3 221 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 ETV2O00321 342 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 OIP5O43482 229 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 STAMBPO95630 424 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 HPNP05981 417 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 RFPL3SP0C7P2 107 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 DSCR4P56555 118 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 PPIAP62937 165 aaKnown RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 PLGLB1Q02325 96 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 CBFBQ13951 182 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 COMTD1Q86VU5 262 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 FAM109AQ8N4B1 249 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 TMEM251Q8N6I4 163 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 OR4K17Q8NGC6 315 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 PROX1Q92786 737 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 UTP4Q969X6 686 aaKnown RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 C1GALT1C1Q96EU7 318 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 SH3YL1Q96HL8 342 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 ARHGDIGQ99819 225 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 DSN1Q9H410 356 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 ZDHHC11Q9H8X9 412 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 HEATR5AQ86XA9 2040 aa10.53□□□□□ -0.72
SCN9A-204ENST00000452182 TLN1Q9Y490 2541 aaKnown RBP10.53□□□□□ -0.72
SCN9A-204ENST00000452182 NCKAP5O14513 1909 aa10.52□□□□□ -0.72
SCN9A-204ENST00000452182 PCNX3Q9H6A9 2034 aa10.52□□□□□ -0.72
SCN9A-204ENST00000452182 A0A087WZY1 265 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 CFAP73A6NFT4 308 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 AQP12BA6NM10 295 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 FMO6PO60774 539 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 ADAM11O75078 769 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 UQCRBP14927 111 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF24P17028 368 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 PGCP20142 388 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 ATP6V1B2P21281 511 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 SRD5A2P31213 254 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.73
SCN9A-204ENST00000452182 MMP16P51512 607 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 DLX5P56178 289 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 EPS8Q12929 822 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 NRF1Q16656 503 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 NDUFAF6Q330K2 333 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 GLYR1Q49A26 553 aaPredicted RBP10.52□□□□□ -0.73
SCN9A-204ENST00000452182 RNFT1Q5M7Z0 435 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 FAM180AQ6UWF9 173 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 SPPL2CQ8IUH8 684 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 AQP12AQ8IXF9 295 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 TMCO5AQ8N6Q1 288 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 GPR119Q8TDV5 335 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 BARD1Q99728 777 aaKnown RBP10.52□□□□□ -0.73
SCN9A-204ENST00000452182 TRIM15Q9C019 465 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 OR2B2Q9GZK3 357 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 ACKR4Q9NPB9 350 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 SLC9A8Q9Y2E8 581 aa10.52□□□□□ -0.73
SCN9A-204ENST00000452182 C7orf72A4D263 438 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms