RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NSMAFQ92636 917 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CDS1Q92903 461 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 DERL3Q96Q80 235 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 RAD9AQ99638 391 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 SLC6A7Q99884 636 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 GLIPR2Q9H4G4 154 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 SEMA4GQ9NTN9 838 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 C11orf98E9PRG8 122 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 F8W036 122 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 HMGN4O00479 90 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 EIF1AYO14602 144 aaKnown RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ACRP10323 421 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 UBL4AP11441 157 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF35P13682 527 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TMEM44Q2T9K0 475 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CDONQ4KMG0 1287 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 OR4C11Q6IEV9 310 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TMPRSS9Q7Z410 1059 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CBARPQ8N350 705 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 OR5M3Q8NGP4 307 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 OR56B4Q8NH76 319 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 LGR4Q9BXB1 951 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF334Q9HCZ1 680 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 IFT46Q9NQC8 304 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 GPATCH2Q9NW75 528 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 ASIC5Q9NY37 505 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 KLHL9Q9P2J3 617 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 MRTO4Q9UKD2 239 aaKnown RBP11.59□□□□□ -0.55
UBE3B-204ENST00000449510 CCL26Q9Y258 94 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 SBF2Q86WG5 1849 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
UBE3B-204ENST00000449510 DUXAA6NLW8 204 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 GPR171O14626 319 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF30P17039 623 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 SMCO1Q147U7 214 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF322Q6U7Q0 402 aaPredicted RBP11.58□□□□□ -0.55
UBE3B-204ENST00000449510 NLRC3Q7RTR2 1065 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 DGLUCYQ7Z3D6 616 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 GID4Q8IVV7 300 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 SDR16C5Q8N3Y7 309 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 OR52I2Q8NH67 350 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 UBTD2Q8WUN7 234 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 CLSTN3Q9BQT9 956 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 TRAF4Q9BUZ4 470 aaPredicted RBP11.58□□□□□ -0.55
UBE3B-204ENST00000449510 IER3IP1Q9Y5U9 82 aa11.58□□□□□ -0.55
UBE3B-204ENST00000449510 F11P03951 625 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LIMS3P0CW19 117 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LIMS4P0CW20 117 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 RAE1P78406 368 aaKnown RBP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 HEPHL1Q6MZM0 1159 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 CD300LGQ6UXG3 332 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 TRAM1L1Q8N609 369 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SLC16A11Q8NCK7 471 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 OR10K1Q8NGX5 313 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LINC01599Q8WXQ3 324 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 RBM18Q96H35 190 aaKnown RBP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LRIG1Q96JA1 1093 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF416Q9BWM5 594 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ACTR6Q9GZN1 396 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 UBQLN3Q9H347 655 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 KCNE3Q9Y6H6 103 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SCN3AQ9NY46 2000 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 A0A0B4J293 547 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 TEX51A0A1B0GUA7 166 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 TRIM64BA6NI03 449 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 M0R036 132 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 KHNYNO15037 678 aaKnown RBP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 UGDHO60701 494 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SOD1P00441 154 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ACSM4P0C7M7 580 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SLC35G6P0C7Q6 338 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 MAP3K8P41279 467 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ST3GAL2Q16842 350 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 UNQ6126/PRO20091Q6UXV3 157 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF783Q6ZMS7 281 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 QSOX2Q6ZRP7 698 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 CD163Q86VB7 1156 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 NAXEQ8NCW5 288 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 OR4D11Q8NGI4 311 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 PMM1Q92871 262 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 RERGQ96A58 199 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 PDXPQ96GD0 296 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 PTCHD1Q96NR3 888 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF350Q9GZX5 532 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 C20orf85Q9H1P6 137 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM38AQ9H6F2 299 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 LYARQ9NX58 379 aaKnown RBP11.58□□□□□ -0.56
UBE3B-204ENST00000449510 ERVK-19Q9WJR5 959 aa11.58□□□□□ -0.56
UBE3B-204ENST00000449510 DCDC2BA2VCK2 349 aa11.57□□□□□ -0.56
UBE3B-204ENST00000449510 PRAMEF25A6NGN4 478 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms