RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ESRRAP11474 423 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 GABRA1P14867 456 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 UQCRBP14927 111 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PGCP20142 388 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 RPS4Y1P22090 263 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 EIF1P41567 113 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 RNF144AP50876 292 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 MNAT1P51948 309 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PER3P56645 1201 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SELPLGQ14242 412 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 MAPK11Q15759 364 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 GXYLT1Q4G148 440 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 C4orf17Q53FE4 359 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 RABL3Q5HYI8 236 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 INTS11Q5TA45 600 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 C1QL3Q5VWW1 255 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 FAM91A1Q658Y4 838 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 VASNQ6EMK4 673 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 MTFR2Q6P444 385 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 CBLN3Q6UW01 205 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 HACD2Q6Y1H2 254 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 C10orf111Q8N326 155 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SPRR3Q9UBC9 169 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TAGLN3Q9UI15 199 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SLC5A6Q9Y289 635 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 GPC6Q9Y625 555 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PRORSD1PA6NEY8 169 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 B4DXG7 233 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 WDR1O75083 606 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF17P17021 662 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 BMP7P18075 431 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TCEA1P23193 301 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PTGER4P35408 488 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 PGM1P36871 562 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SLC6A8P48029 635 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 GFRA1P56159 465 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 CRYZQ08257 329 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 SKP2Q13309 424 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 C3AR1Q16581 482 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF311Q5JNZ3 666 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 MRPL2Q5T653 305 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ERICH5Q6P6B1 374 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ARSKQ6UWY0 536 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 DOLPP1Q86YN1 238 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 CHERPQ8IWX8 916 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF440Q8IYI8 595 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 BHLHE22Q8NFJ8 381 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TMEM234Q8WY98 164 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 RELTQ969Z4 430 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TIMP4Q99727 224 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 UGT2B28Q9BY64 529 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 MED17Q9NVC6 651 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ALKBH4Q9NXW9 302 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TNFRSF10DQ9UBN6 386 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 TINAGQ9UJW2 476 aa11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF443Q9Y2A4 671 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-209ENST00000447986 C7orf72A4D263 438 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 CCL21O00585 134 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 LRRTM2O43300 516 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 AGFG2O95081 481 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PEPDP12955 493 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 ME2P23368 584 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 ADH6P28332 368 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 ADRM1Q16186 407 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 VMACQ2NL98 169 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 NDUFAF6Q330K2 333 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 FJX1Q86VR8 437 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 VRK2Q86Y07 508 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PTOV1Q86YD1 416 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 FAM71CQ8NEG0 241 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 OR5M9Q8NGP3 310 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 ZNF563Q8TA94 476 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 REXO5Q96IC2 774 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PIF1Q9H611 641 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 PNPLA3Q9NST1 481 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 SLC13A4Q9UKG4 626 aa11.85□□□□□ -0.51
ERGIC3-209ENST00000447986 OR2M5A3KFT3 312 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 CDHR4A6H8M9 788 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 CLDN24A6NM45 220 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 E9PLN8 166 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 LINGO3P0C6S8 592 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 CPN1P15169 458 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 POU3F2P20265 443 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 AQP1P29972 269 aa11.84□□□□□ -0.51
ERGIC3-209ENST00000447986 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms