RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 OR5M10Q6IEU7 315 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 HMBOX1Q6NT76 420 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 ZNF227Q86WZ6 799 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 B4GALNT2Q8NHY0 566 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 PHF10Q8WUB8 498 aaKnown RBP17.83■□□□□ 0.45
SGCE-207ENST00000447873 CENPNQ96H22 339 aaPredicted RBP17.83■□□□□ 0.45
SGCE-207ENST00000447873 PRRC1Q96M27 445 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 SIGLEC12Q96PQ1 595 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 ZNF559Q9BR84 538 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 RNF32Q9H0A6 362 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 CTPS2Q9NRF8 586 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 RHCGQ9UBD6 479 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 RIMS3Q9UJD0 308 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 TESMINQ9Y4I5 508 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 A0A087WV48 116 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 TAF4O00268 1085 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 ADAMDEC1O15204 470 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 ADAM11O75078 769 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 LINGO3P0C6S8 592 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 RRM2P31350 389 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 COPZ1P61923 177 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 EPS8Q12929 822 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 GANABQ14697 944 aaKnown RBP17.83■□□□□ 0.44
SGCE-207ENST00000447873 PLEKHM3Q6ZWE6 761 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 PACS2Q86VP3 889 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 TOR1AIP2Q8NFQ8 470 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 NR4A3Q92570 626 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 HAS2Q92819 552 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 REEP1Q9H902 201 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 TMEM27Q9HBJ8 222 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 ICAM5Q9UMF0 924 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 A4GNTQ9UNA3 340 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 NTNG1Q9Y2I2 539 aa17.83■□□□□ 0.44
SGCE-207ENST00000447873 G3V3Y1 287 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 FFAR1O14842 300 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 SLC25A12O75746 678 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 SNX4O95219 450 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 NUDT14O95848 222 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 HTR2AP28223 471 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 SLC6A8P48029 635 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 P2RX1P51575 399 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 CDH12P55289 794 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 SPIBQ01892 262 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 CBFBQ13951 182 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 COL28A1Q2UY09 1125 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 BORAQ6PGQ7 559 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 OR5W2Q8NH69 310 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 ADAMTS16Q8TE57 1224 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 FNDC11Q9BVV2 318 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 TRIM2Q9C040 744 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 ACAD8Q9UKU7 415 aa17.82■□□□□ 0.44
SGCE-207ENST00000447873 LOC400499M0QZD8 3231 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 DPM1O60762 260 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 E2F6O75461 281 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 MSX1P28360 303 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 MASP1P48740 699 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 FOXD4Q12950 439 aaPredicted RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 OR1Q1Q15612 314 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 TSPYL5Q86VY4 417 aaPredicted RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 CADM2Q8N3J6 435 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 ICA1LQ8NDH6 482 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 FRMD6Q96NE9 622 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 POLR2J2Q9GZM3 115 aaKnown RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.81■□□□□ 0.44
SGCE-207ENST00000447873 POLR2J3Q9H1A7 115 aaKnown RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 NMNAT1Q9HAN9 279 aaPredicted RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 NTN4Q9HB63 628 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 PROK2Q9HC23 129 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 MED11Q9P086 117 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 SAMHD1Q9Y3Z3 626 aaKnown RBP17.81■□□□□ 0.44
SGCE-207ENST00000447873 U3KQV3 271 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 PCNX3Q9H6A9 2034 aa17.81■□□□□ 0.44
SGCE-207ENST00000447873 IGLV3-32A0A0A0MS00 114 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 TMEM8BA6NDV4 472 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 PRSS23O95084 383 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 OR5F1O95221 314 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 H1F0P07305 194 aaKnown RBP17.8■□□□□ 0.44
SGCE-207ENST00000447873 CD46P15529 392 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 PGCP20142 388 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 IDH2P48735 452 aaKnown RBP17.8■□□□□ 0.44
SGCE-207ENST00000447873 SMIM11AP58511 58 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 INPP5JQ15735 1006 aaPredicted RBP17.8■□□□□ 0.44
SGCE-207ENST00000447873 IGFL2Q6UWQ7 119 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 ZNF605Q86T29 641 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 OFCC1Q8IZS5 231 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 LSMEM1Q8N8F7 131 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 OR52J3Q8NH60 311 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 ZNF563Q8TA94 476 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 JSRP1Q96MG2 331 aaPredicted RBP17.8■□□□□ 0.44
SGCE-207ENST00000447873 SMAD5Q99717 465 aaKnown RBP17.8■□□□□ 0.44
SGCE-207ENST00000447873 RPS6KB2Q9UBS0 482 aa17.8■□□□□ 0.44
SGCE-207ENST00000447873 TRAPPC13A5PLN9 417 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 TNFRSF11BO00300 401 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 GNB5O14775 395 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 GADD45GO95257 159 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 CNR1P21554 472 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 DNASE1L1P49184 302 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SUMO3P55854 103 aaPredicted RBP17.79■□□□□ 0.44
SGCE-207ENST00000447873 CXADRP78310 365 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ST3GAL3Q11203 375 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms