RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 JCHAINP01591 159 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ALOX5P09917 674 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 RHOXF2BP0C7M4 288 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF883P0CG24 379 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 BCKDHAP12694 445 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 UGT1A5P35504 534 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 OPRL1P41146 370 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ERVK11-1P61568 191 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 BDH1Q02338 343 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 MECOMQ03112 1051 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF85Q03923 595 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 RAB35Q15286 201 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CD226Q15762 336 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PIP5KL1Q5T9C9 394 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 WDR25Q64LD2 544 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PRR5LQ6MZQ0 368 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF497Q6ZNH5 498 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 EIF3MQ7L2H7 374 aaKnown RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 LUZP2Q86TE4 346 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF614Q8N883 585 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR2T6Q8NHC8 308 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 BADQ92934 168 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 HAVCR1Q96D42 359 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF300Q96RE9 604 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CCT8L2Q96SF2 557 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 RHOXF2Q9BQY4 288 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 STMN4Q9H169 189 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 TAS2R16Q9NYV7 291 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 GCNT4Q9P109 453 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 SEC14L4Q9UDX3 406 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF221Q9UK13 617 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PPP1R3CQ9UQK1 317 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 RASD1Q9Y272 281 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 ABCA5Q8WWZ7 1642 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 KDM5BQ9UGL1 1544 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PBRM1Q86U86 1689 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 FRMPD4Q14CM0 1322 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 PIK3R4Q99570 1358 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 PCNX3Q9H6A9 2034 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 LINC00854A0A1B0GVQ3 168 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 KRTAP16-1A8MUX0 517 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 GOLGA8SH3BPF8 625 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 FBP2O00757 339 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 POLR2DO15514 142 aaKnown RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 AKR7A2O43488 359 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CLDN9O95484 217 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 OTCP00480 354 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CGAP01215 116 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 HBQ1P09105 142 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 IMPDH1P20839 514 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CALML3P27482 149 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPL13AP40429 203 aaKnown RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TSFMP43897 325 aaKnown RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CDKN1BP46527 198 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC11A1P49279 550 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 VEGFCP49767 419 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 NOVA1P51513 510 aaKnown RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CLDN8P56748 225 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 C21orf59P57076 290 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 RGS8P57771 180 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 OTUD4Q01804 1114 aaKnown RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 DHODHQ02127 395 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 OGDHQ02218 1023 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 OC90Q02509 493 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 PLOD1Q02809 727 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 MERTKQ12866 999 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 DNAJC3Q13217 504 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 MAB21L1Q13394 359 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 MTF1Q14872 753 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 MLF2Q15773 248 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 ECSCRQ19T08 205 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 ALKBH6Q3KRA9 238 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TMEM52BQ4KMG9 183 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 BEND3Q5T5X7 828 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CCDC50Q8IVM0 306 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 GTPBP8Q8N3Z3 284 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 DHRSXQ8N5I4 330 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZSCAN4Q8NAM6 433 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR4C5Q8NGB2 326 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 NTNG2Q96CW9 530 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TM4SF19Q96DZ7 209 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 NSMCE3Q96MG7 304 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TSNARE1Q96NA8 513 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TECTBQ96PL2 329 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TNFRSF13CQ96RJ3 184 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 CENPKQ9BS16 269 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TRIM62Q9BVG3 475 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 IKZF5Q9H5V7 419 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 NARFLQ9H6Q4 476 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 NT5DC2Q9H857 520 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 ANKRA2Q9H9E1 313 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms