RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 HPXP02790 462 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 RAF1P04049 648 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 FCER2P06734 321 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 ASGR2P07307 311 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 HK1P19367 917 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 BTG1P62324 171 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 RGS1Q08116 209 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 CRYZQ08257 329 aaKnown RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 ST3GAL2Q16842 350 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 HNRNPA1L2Q32P51 320 aaKnown RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 TP53I3Q53FA7 332 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 MBOAT2Q6ZWT7 520 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 ERN2Q76MJ5 926 aaKnown RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-203ENST00000445889 THAP4Q8WY91 577 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 GHSRQ92847 366 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 SCMH1Q96GD3 660 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 PEX11GQ96HA9 241 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 CAMK1GQ96NX5 476 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 RNF208Q9H0X6 261 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 ADAP2Q9NPF8 381 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 BRD7Q9NPI1 651 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 INSL6Q9Y581 213 aa13.21□□□□□ -0.29
ERCC3-203ENST00000445889 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 B8ZZF3 427 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 SOX30O94993 753 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 F3P13726 295 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 CFL1P23528 166 aaKnown RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 PTBP1P26599 531 aaKnown RBP eCLIP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 NUDT1P36639 197 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 STAT5AP42229 794 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 ACSM3Q53FZ2 586 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 TRMT12Q53H54 448 aaKnown RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 NIPAL3Q6P499 406 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 FIGNL1Q6PIW4 674 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF836Q6ZNA1 936 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 FANK1Q8TC84 345 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 ACOT12Q8WYK0 555 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 RANBP3Q9H6Z4 567 aaPredicted RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 HEXA-AS1Q9H8Q6 139 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 SIDT1Q9NXL6 827 aaKnown RBP13.21□□□□□ -0.3
ERCC3-203ENST00000445889 SERGEFQ9UGK8 458 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 CACNA1CQ13936 2221 aa13.21□□□□□ -0.3
ERCC3-203ENST00000445889 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CDHR4A6H8M9 788 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 IMPA2O14732 288 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CLEC3AO75596 197 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 MTNR1BP49286 362 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 SNTA1Q13424 505 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 DUSP5Q16690 384 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CDONQ4KMG0 1287 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 BHLHB9Q6PI77 547 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 SLC39A5Q6ZMH5 540 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 MEPCEQ7L2J0 689 aaKnown RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 GANCQ8TET4 914 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 GIMAP1Q8WWP7 306 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 WDR89Q96FK6 387 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 TEAD3Q99594 435 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 OR6C2Q9NZP2 312 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CES1P1Q9UKY3 287 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 A0A087WV48 116 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 SHOXO15266 292 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 SERPINI2O75830 405 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 OR7A10O76100 309 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 MPC2O95563 127 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 WNT1P04628 370 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ERGP11308 486 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 BMP7P18075 431 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ATF1P18846 271 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 HTR2AP28223 471 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CLDN12P56749 244 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 MLC1Q15049 377 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 OR4E2Q8NGC2 313 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 GIMAP5Q96F15 307 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 SPRTNQ9H040 489 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF443Q9Y2A4 671 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-203ENST00000445889 DNASE1P24855 282 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms