RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 EI24O14681 340 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 FCMRO60667 390 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 NOS1APO75052 506 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 STX11O75558 287 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 RASAL1O95294 804 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 RECKO95980 971 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 KLK3P07288 261 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 BMP4P12644 408 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 DCTP40126 519 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 HTR3AP46098 478 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ST13P50502 369 aaKnown RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 TOP3AQ13472 1001 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 SHISA6Q6ZSJ9 500 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 OR5K1Q8NHB7 308 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 C16orf52Q8NHV5 167 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 TEX47Q8TBZ9 253 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ART5Q96L15 291 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 VSTM2LQ96N03 204 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF300Q96RE9 604 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 LMF2Q9BU23 707 aaKnown RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 SLC13A4Q9UKG4 626 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 MKLN1Q9UL63 735 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 SAMHD1Q9Y3Z3 626 aaKnown RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PCDHGA1Q9Y5H4 931 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 GMPPBQ9Y5P6 360 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ENPP4Q9Y6X5 453 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 SEC16AO15027 2179 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ADAMDEC1O15204 470 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 DPM1O60762 260 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 UPK1BO75841 260 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ALBP02768 609 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 HEXBP07686 556 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 HOXD4P09016 255 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PPP5CP53041 499 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 RAD23AP54725 363 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PSG6Q00889 435 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 INSM1Q01101 510 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PPP1R8Q12972 351 aaKnown RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF311Q5JNZ3 666 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 FRRS1Q6ZNA5 592 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 HIPK1Q86Z02 1210 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF615Q8N8J6 731 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 OR14A16Q8NHC5 309 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 VANGL1Q8TAA9 524 aaPredicted RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PINK1Q9BXM7 581 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 OR8D2Q9GZM6 311 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF350Q9GZX5 532 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 QRSL1Q9H0R6 528 aaKnown RBP7.48□□□□□ -1.21
CCDC39-201ENST00000442201 POLR1BQ9H9Y6 1135 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 Q9N2J8 555 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF229Q9UJW7 825 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 SLC9A8Q9Y2E8 581 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 LOXL2Q9Y4K0 774 aa7.48□□□□□ -1.21
CCDC39-201ENST00000442201 PRAMEF25A6NGN4 478 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 IDSB3KWA1 339 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 GATCO43716 136 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 UGT2B11O75310 529 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 DNAJA1P31689 397 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 EFNA3P52797 238 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 PUM1Q14671 1186 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ISXQ2M1V0 245 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 TYW3Q6IPR3 259 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 KCTD8Q6ZWB6 473 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 TSEN54Q7Z6J9 526 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 HMGN2P46Q86SG4 172 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OR6Q1Q8NGQ2 317 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OR52P1PQ8NH57 321 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 MAGEE2Q8TD90 523 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 APOBEC4Q8WW27 367 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 METTL21AQ8WXB1 218 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 LRFN5Q96NI6 719 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ULBP3Q9BZM4 244 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 AMBRA1Q9C0C7 1298 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 POLE3Q9NRF9 147 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 PLSCR3Q9NRY6 295 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 GXYLT2A0PJZ3 443 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 VSTM2BA6NLU5 285 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SYT5O00445 386 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ZIC2O95409 532 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 YES1P07947 543 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF28P17035 718 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 RHCEP18577 417 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 FPR1P21462 350 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 TRHRP34981 398 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 HOXA1P49639 335 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 EMP2P54851 167 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 AQP6Q13520 282 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 DAG1Q14118 895 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 LARS2Q15031 903 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 GPR68Q15743 365 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 DCAF12Q5T6F0 453 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SHQ1Q6PI26 577 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 FIGNL1Q6PIW4 674 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SLC16A12Q6ZSM3 486 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 RAB11FIP2Q7L804 512 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SNX29P2Q8IUI4 249 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms