RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DNAJC14Q6Y2X3 702 aaPredicted RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 EIF3MQ7L2H7 374 aaKnown RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 GGNQ86UU5 652 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 GCNT2Q8N0V5 402 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF619Q8N2I2 560 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 OR5W2Q8NH69 310 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 TRNT1Q96Q11 434 aaKnown RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 EBF4Q9BQW3 602 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 SAP130Q9H0E3 1048 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 ABCA12Q86UK0 2595 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 EIF1AYO14602 144 aaKnown RBP22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 CSTAP01040 98 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 FCGR2AP12318 317 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 CCR4P51679 360 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 AGFG1P52594 562 aaKnown RBP22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 FUT5Q11128 374 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 FOXF2Q12947 444 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 C6orf10Q5SRN2 563 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 PLXDC2Q6UX71 529 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 ESPNLQ6ZVH7 1005 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 ZFP90Q8TF47 636 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 ARSGQ96EG1 525 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 LAT2Q9GZY6 243 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 PIGMQ9H3S5 423 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 KCNE5Q9UJ90 142 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 SLC35A3Q9Y2D2 325 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 DCHS2Q6V1P9 2916 aa22.26■■□□□ 1.15
RAPGEF1-206ENST00000438647 OIP5O43482 229 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 EIF1AXP47813 144 aaKnown RBP22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 DLX5P56178 289 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 FOXF1Q12946 379 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 PON3Q15166 354 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 PDSS1Q5T2R2 415 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 FRRS1Q6ZNA5 592 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 KIF18BQ86Y91 864 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 RFWD2Q8NHY2 731 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 POC1BQ8TC44 478 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 PNPT1Q8TCS8 783 aaKnown RBP22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 GPR119Q8TDV5 335 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 STON2Q8WXE9 905 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 FIG4Q92562 907 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 VPS33AQ96AX1 596 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 MRGPRX4Q96LA9 322 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 JKAMPQ9P055 326 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 L3MBTL1Q9Y468 752 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 APCP25054 2843 aa22.25■■□□□ 1.15
RAPGEF1-206ENST00000438647 GJE1A6NN92 205 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 CYP7B1O75881 506 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 H6PDO95479 791 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 TLE4Q04727 773 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 MYBPHQ13203 477 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 SKP2Q13309 424 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 FGFBP1Q14512 234 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 NDUFAF6Q330K2 333 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 OLIG3Q7RTU3 272 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 FNDC9Q8TBE3 224 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 ZNF845Q96IR2 970 aaPredicted RBP22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 NPAS1Q99742 590 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 KLHDC3Q9BQ90 382 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 ZNF559Q9BR84 538 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 PRRG4Q9BZD6 226 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 RNF122Q9H9V4 155 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 TPT1P8Q9HAU6 139 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 TMEM45AQ9NWC5 275 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 PACSIN3Q9UKS6 424 aa22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 MCTS1Q9ULC4 181 aaKnown RBP22.24■■□□□ 1.15
RAPGEF1-206ENST00000438647 CENPVL1A0A0U1RR11 272 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 A0A1W2PNV4 684 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 ADAMDEC1O15204 470 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 UBTFL6P0CB48 400 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 NR2F1P10589 423 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 PRKCAP17252 672 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 MAPK14Q16539 360 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 LRRC74BQ6ZQY2 392 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 MED12LQ86YW9 2145 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 LILRA2Q8N149 483 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 OR10D3Q8NH80 312 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 OR2V1Q8NHB1 315 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 FBXO27Q8NI29 283 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 PMM1Q92871 262 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 ADGRG7Q96K78 797 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 KLHL15Q96M94 604 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 SIKE1Q9BRV8 207 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 TMEM185BQ9H7F4 350 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 MCCC2Q9HCC0 563 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 THUMPD1Q9NXG2 353 aaKnown RBP22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 P2RX2Q9UBL9 471 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 FBN2P35556 2912 aa22.23■■□□□ 1.15
RAPGEF1-206ENST00000438647 PRAMEF27A3QJZ7 478 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 SYNGR4O95473 234 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 C1QCP02747 245 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 PGCP20142 388 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 KIR2DL3P43628 341 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 CPA2P48052 419 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 ATP4BP51164 291 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 CHRNEQ04844 493 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 GNA13Q14344 377 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 QPRTQ15274 297 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 TOMM34Q15785 309 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms