RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ART3Q13508 389 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 TOMM34Q15785 309 aaPredicted RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 EMC4Q5J8M3 183 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 C8orf82Q6P1X6 216 aaPredicted RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 HACD2Q6Y1H2 254 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 METTL25Q8N6Q8 603 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 TOR1AIP2Q8NFQ8 470 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 OR5W2Q8NH69 310 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF524Q96C55 264 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 ECSITQ9BQ95 431 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 LAT2Q9GZY6 243 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 CACYBPQ9HB71 228 aaKnown RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 CMTM6Q9NX76 183 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 DNAJB12Q9NXW2 375 aaKnown RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 GMPR2Q9P2T1 348 aaKnown RBP14.63□□□□□ -0.07
SNRPB-202ENST00000438552 TAGLN3Q9UI15 199 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 ACAD8Q9UKU7 415 aa14.63□□□□□ -0.07
SNRPB-202ENST00000438552 A0A087WZY1 265 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 OR2M5A3KFT3 312 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 CCT8L1PA6NM43 557 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 NME4O00746 187 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 THBS1P07996 1170 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 LINGO3P0C6S8 592 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 PABPC4LP0CB38 370 aaKnown RBP14.62□□□□□ -0.07
SNRPB-202ENST00000438552 PCGF2P35227 344 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 SLC7A2P52569 658 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 CASP6P55212 293 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 EEF1A1P68104 462 aaKnown RBP14.62□□□□□ -0.07
SNRPB-202ENST00000438552 RBBP4Q09028 425 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 CBFBQ13951 182 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 LARS2Q15031 903 aaKnown RBP14.62□□□□□ -0.07
SNRPB-202ENST00000438552 VMACQ2NL98 169 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 TMEM44Q2T9K0 475 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.62□□□□□ -0.07
SNRPB-202ENST00000438552 NHSL2Q5HYW2 709 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 WLSQ5T9L3 541 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 RNF220Q5VTB9 566 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 VASNQ6EMK4 673 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 ARPINQ7Z6K5 226 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 FJX1Q86VR8 437 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 DOLPP1Q86YN1 238 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 CMIPQ8IY22 773 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 GPR119Q8TDV5 335 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 RNF145Q96MT1 663 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 TIMP4Q99727 224 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 SPATA9Q9BWV2 254 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 GPC6Q9Y625 555 aaPredicted RBP14.62□□□□□ -0.07
SNRPB-202ENST00000438552 ARHGAP21Q5T5U3 1957 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 KIAA1549Q9HCM3 1950 aa14.62□□□□□ -0.07
SNRPB-202ENST00000438552 CDHR4A6H8M9 788 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 FAM220BPB1ANY3 271 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 H3BML4 177 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 AP3D1O14617 1153 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ADAM11O75078 769 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 SEMA7AO75326 666 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ACTL6AO96019 429 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 OPN1SWP03999 348 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ETS2P15036 469 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF17P17021 662 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 CHMP24386 653 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 RYKP34925 604 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 STARP49675 285 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 PCBP3P57721 371 aaKnown RBP14.61□□□□□ -0.07
SNRPB-202ENST00000438552 QPRTQ15274 297 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 GXYLT1Q4G148 440 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 C4orf17Q53FE4 359 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF311Q5JNZ3 666 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF585AQ6P3V2 769 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 AAGABQ6PD74 315 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 NCCRP1Q6ZVX7 275 aaPredicted RBP14.61□□□□□ -0.07
SNRPB-202ENST00000438552 KRT73Q86Y46 540 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 SLC15A3Q8IY34 581 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 FBXO27Q8NI29 283 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 POC1BQ8TC44 478 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 SMPDL3BQ92485 455 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ZBTB8AQ96BR9 441 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 REXO5Q96IC2 774 aaKnown RBP14.61□□□□□ -0.07
SNRPB-202ENST00000438552 ZNF583Q96ND8 569 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 PIGQQ9BRB3 760 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 RSPO3Q9BXY4 272 aaPredicted RBP14.61□□□□□ -0.07
SNRPB-202ENST00000438552 EXOSC3Q9NQT5 275 aaKnown RBP14.61□□□□□ -0.07
SNRPB-202ENST00000438552 CAMK2AQ9UQM7 478 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 IFT52Q9Y366 437 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 CHST2Q9Y4C5 530 aa14.61□□□□□ -0.07
SNRPB-202ENST00000438552 PHF3Q92576 2039 aaKnown RBP14.6□□□□□ -0.07
SNRPB-202ENST00000438552 C7orf72A4D263 438 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 LRRTM2O43300 516 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 GCM2O75603 506 aaPredicted RBP14.6□□□□□ -0.07
SNRPB-202ENST00000438552 PRKCAP17252 672 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 PGCP20142 388 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 POU3F2P20265 443 aaPredicted RBP14.6□□□□□ -0.07
SNRPB-202ENST00000438552 LHX2P50458 406 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 PSME3P61289 254 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 KCNC4Q03721 635 aa14.6□□□□□ -0.07
SNRPB-202ENST00000438552 GABPB1Q06547 395 aaPredicted RBP14.6□□□□□ -0.07
SNRPB-202ENST00000438552 SRSF1Q07955 248 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNRPB-202ENST00000438552 KRT72Q14CN4 511 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms