RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 LRRC18Q8N456 261 aa16.11■□□□□ 0.17
PTPRF-209ENST00000438120 SLC22A12Q96S37 553 aa16.11■□□□□ 0.17
PTPRF-209ENST00000438120 SYT3Q9BQG1 590 aa16.11■□□□□ 0.17
PTPRF-209ENST00000438120 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
PTPRF-209ENST00000438120 H3BMQ9 156 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 UBFD1O14562 309 aaKnown RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 BCAS1O75363 584 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 OPRL1P41146 370 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ACSM3Q53FZ2 586 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 KIF18BQ86Y91 864 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ZNF695Q8IW36 515 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 FNDC8Q8TC99 324 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 COG8Q96MW5 612 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 GPN2Q9H9Y4 310 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 B3GNT2Q9NY97 397 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 EFCAB7A8K855 629 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 MBTPS1Q14703 1052 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 IL17RDQ8NFM7 739 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 OR2A12Q8NGT7 310 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 IL1F10Q8WWZ1 152 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 SLC6A17Q9H1V8 727 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 TAS2R8Q9NYW2 309 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 MYO9BQ13459 2157 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 H0YGG7 62 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 MSL3P1P0C860 447 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 TDGQ13569 410 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 SLC5A12Q1EHB4 618 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 VASNQ6EMK4 673 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 PPP1R3BQ86XI6 285 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 PGBD5Q8N414 524 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 S100PBPQ96BU1 408 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 CLMPQ9H6B4 373 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 A0A0G2JMP0 313 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 F10P00742 488 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 PTPN6P29350 595 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 KEAP1Q14145 624 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 NKAIN2Q5VXU1 208 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ANKRD54Q6NXT1 300 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ZNF704Q6ZNC4 412 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 OR4M2Q8NGB6 313 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 CUTCQ9NTM9 273 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 CAMK2AQ9UQM7 478 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 SLC35A3Q9Y2D2 325 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 AIFM1O95831 613 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ALDOCP09972 364 aaKnown RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 POU3F1Q03052 451 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ARHGAP19Q14CB8 494 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 LEXMQ3ZCV2 418 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ADAMTS19Q8TE59 1207 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 ZFAND2BQ8WV99 257 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 CHFRQ96EP1 664 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 SYT11Q9BT88 431 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 SRPK3Q9UPE1 567 aa16.1■□□□□ 0.17
PTPRF-209ENST00000438120 RAB3DO95716 219 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 ARSBP15848 533 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 HTR2BP41595 481 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SEC61A1P61619 476 aaKnown RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SPOCK1Q08629 439 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SLC22A6Q4U2R8 563 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 ELP2Q6IA86 826 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 RBM12BQ8IXT5 1001 aaKnown RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 EGLN3Q9H6Z9 239 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 NSG1A0A0A6YYJ2 146 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 ANKRD30BLA7E2S9 258 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 OR2T1O43869 369 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SLC22A5O76082 557 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SPDEFO95238 335 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 IDUAP35475 653 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 Q6ZPB1 254 aaPredicted RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 KCTD20Q7Z5Y7 419 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 ULBP3Q9BZM4 244 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 FOLH1BQ9HBA9 442 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 TBCCD1Q9NVR7 557 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 TEX10Q9NXF1 929 aaPredicted RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 MED16Q9Y2X0 877 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 ARPC5O15511 151 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 PRKRAO75569 313 aaKnown RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 PHB2Q99623 299 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 C1QTNF2Q9BXJ5 285 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 URB1O60287 2271 aaKnown RBP16.09■□□□□ 0.17
PTPRF-209ENST00000438120 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 RAB4BP61018 213 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 MGAT3Q09327 533 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 OR4F15Q8NGB8 312 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 OR4D6Q8NGJ1 314 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 OR51Q1Q8NH59 317 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 DCUN1D4Q92564 292 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 G3V3Y1 287 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 H3BUI4 141 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 PEX14O75381 377 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 IFNA1P01562 189 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 AGTR1P30556 359 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 TM4SF4P48230 202 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 INHBCP55103 352 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 KRBOX4Q5JUW0 171 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 SLC22A10Q63ZE4 541 aa16.09■□□□□ 0.17
PTPRF-209ENST00000438120 LCN10Q6JVE6 187 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms