RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SERINC4A6NH21 518 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 CLPXO76031 633 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 CSTAP01040 98 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 GP1BAP07359 652 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 HBQ1P09105 142 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 PTCHD4Q6ZW05 846 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 AHSA2Q719I0 299 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 SLC15A4Q8N697 577 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 GNPDA2Q8TDQ7 276 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 ART5Q96L15 291 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 SPSB2Q99619 263 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 WWTR1Q9GZV5 400 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 C14orf105Q9NVL8 296 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 FAIMQ9NVQ4 179 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 PCDHGB2Q9Y5G2 931 aa19.43■□□□□ 0.7
PTPRF-207ENST00000436724 TEX51A0A1B0GUA7 166 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 KPNA4O00629 521 aaPredicted RBP19.42■□□□□ 0.7
PTPRF-207ENST00000436724 FMO6PO60774 539 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 IL33O95760 270 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 IFNGR2P38484 337 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 GPR143P51810 404 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 CLDN6P56747 220 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 TSPAN31Q12999 210 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 CD226Q15762 336 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 SLX4IPQ5VYV7 408 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 APOOLQ6UXV4 268 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 PFN4Q8NHR9 129 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 C20orf141Q9NUB4 165 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 VSTM2BA6NLU5 285 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 CDC42EP2O14613 210 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 MAN1A2O60476 641 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 CPNE3O75131 537 aaKnown RBP19.42■□□□□ 0.7
PTPRF-207ENST00000436724 ALOX12BO75342 701 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 MAP2K4P45985 399 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 KLHL26Q53HC5 615 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 HLA-DQA1Q5Y7H0 255 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 OR8D4Q8NGM9 314 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 ZNF559Q9BR84 538 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 TMEM27Q9HBJ8 222 aa19.42■□□□□ 0.7
PTPRF-207ENST00000436724 A0A1B0GWA3 101 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 J3QRK9 145 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 REM1O75628 298 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 CD59P13987 128 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 FUT1P19526 365 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 EMP2P54851 167 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 PSMD4P55036 377 aaKnown RBP19.41■□□□□ 0.7
PTPRF-207ENST00000436724 GINS1Q14691 196 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 ACSM5Q6NUN0 579 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 C16orf47Q6ZP98 133 aaPredicted RBP19.41■□□□□ 0.7
PTPRF-207ENST00000436724 SLC29A4Q7RTT9 530 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 CADM2Q8N3J6 435 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 TMEM239Q8WW34 195 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 C8orf44Q96CB5 159 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 ATP13A2Q9NQ11 1180 aa19.41■□□□□ 0.7
PTPRF-207ENST00000436724 ZNF223Q9UK11 482 aaPredicted RBP19.41■□□□□ 0.7
PTPRF-207ENST00000436724 COL27A1Q8IZC6 1860 aaPredicted RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 A0A0B4J2E0 115 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 A0A1B0GX12 115 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 GALR2O43603 387 aaPredicted RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 UTS2O95399 124 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 GSTM3P21266 225 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 GIPRP48546 466 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 MVKQ03426 396 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 CLEC12AQ5QGZ9 265 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 C12orf73Q69YU5 71 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 POGLUT1Q8NBL1 392 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 C7orf57Q8NEG2 295 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 TRUB1Q8WWH5 349 aaKnown RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 METTL21AQ8WXB1 218 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 UBQLN4Q9NRR5 601 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 IL20RAQ9UHF4 553 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 FREM2Q5SZK8 3169 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 KLF4O43474 513 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 OIP5O43482 229 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 ICOSLGO75144 302 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 ONECUT2O95948 504 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 HPGDP15428 266 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 MASP1P48740 699 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 MC2RQ01718 297 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 ZNF613Q6PF04 617 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 BCDIN3DQ7Z5W3 292 aaKnown RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 BPHLQ86WA6 291 aaPredicted RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 APCDD1LQ8NCL9 501 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 TOR1AIP2Q8NFQ8 470 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 CRB3Q9BUF7 120 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 RTN4RQ9BZR6 473 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 POLR2J2Q9GZM3 115 aaKnown RBP19.4■□□□□ 0.7
PTPRF-207ENST00000436724 GPR83Q9NYM4 423 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 TVP23BQ9NYZ1 205 aa19.4■□□□□ 0.7
PTPRF-207ENST00000436724 SYNDIG1LA6NDD5 238 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 MT-ND2P03891 347 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 FPR3P25089 353 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 MRPL14Q6P1L8 145 aaKnown RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 CBLN3Q6UW01 205 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 KIRREL2Q6UWL6 708 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 CASP12Q6UXS9 341 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 TCEANCQ8N8B7 351 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 NFAM1Q8NET5 270 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 THAP3Q8WTV1 239 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 RORBQ92753 470 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms